Index

A

Abundance (class in tardis.plasma.properties.plasma_input) abundance (tardis.model.base.SimulationState property) add_callback() (tardis.simulation.base.Simulation method) ADIABATIC_COOLING (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) (tardis.transport.montecarlo.r_packet.PacketStatus attribute) adiabatic_cooling() (in module tardis.transport.montecarlo.interaction) AdiabaticCoolingRate (class in tardis.plasma.properties.continuum_processes.rates) advance_state() (tardis.simulation.base.Simulation method) AnalyticPhotoionizationCoeffSolver (class in tardis.plasma.equilibrium.rates.photoionization_strengths) AnalyticPhotoionizationRateSolver (class in tardis.plasma.equilibrium.rates.photoionization_rates) angle_aberration_CMF_to_LF() (in module tardis.transport.frame_transformations) angle_aberration_gamma() (in module tardis.energy_input.util) angle_aberration_LF_to_CMF() (in module tardis.transport.frame_transformations) apply_to_multiple_shells() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) ArepoSnapshot (class in tardis.io.model.readers.arepo) ArrayInput (class in tardis.plasma.properties.base) ArtisModelData (class in tardis.io.model.readers.artis)

as_atoms() (tardis.model.matter.decay.IsotopicMassFraction method) assemble() (tardis.plasma.assembly.base.PlasmaSolverFactory method) assemble_isotope_masses() (tardis.model.matter.composition.Composition method) assemble_plasma() (in module tardis.plasma.assembly.legacy_assembly) (in module tardis.plasma.standard_plasmas) assert_equality() (in module tardis.io.util) AsyncEmitLogHandler (class in tardis.io.logger.logger) AtomData (class in tardis.io.atom_data.base) AtomDataMissingError AtomDataNotPreparedError atomic_name (tardis.visualization.widgets.grotrian.GrotrianPlot property) atomic_number (tardis.analysis.LastLineInteraction property) (tardis.visualization.widgets.grotrian.GrotrianPlot property) atomic_number2element_symbol() (in module tardis.util.base) atomic_symbol (tardis.visualization.widgets.grotrian.GrotrianPlot property) AtomicData (class in tardis.plasma.properties.plasma_input) axis_label_in_latex() (in module tardis.visualization.plot_util)

B

BaseAtomicDataProperty (class in tardis.plasma.properties.base) BasePacketSource (class in tardis.transport.montecarlo.packet_source) BasePlasma (class in tardis.plasma.base) BasePlasmaProperty (class in tardis.plasma.properties.base) BaseShellInfo (class in tardis.visualization.widgets.shell_info) BB_EMISSION (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) BETA_DECAY (tardis.energy_input.GXPacket.GXPacketStatus attribute) BetaElectron (class in tardis.plasma.properties.general) BetaRadiation (class in tardis.plasma.properties.general) BetaSobolev (class in tardis.opacities.tau_sobolev) BF_COOLING (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) bf_cooling() (in module tardis.transport.montecarlo.interaction) BF_EMISSION (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) bf_threshold_list_nu (tardis.opacities.continuum.continuum_state.ContinuumState property)

BfHeatingRateCoeffEstimator (class in tardis.plasma.properties.continuum_processes.rates) blackbody_packet_source (tardis.model.base.SimulationState property) BlackBodySimpleSource (class in tardis.transport.montecarlo.packet_source) BlackBodySimpleSourceRelativistic (class in tardis.transport.montecarlo.packet_source) BlackBodyWeightedSource (class in tardis.transport.montecarlo.weighted_packet_source) block_reference_data (tardis.io.atom_data.macro_atom_data.MacroAtomData attribute) bound_free_emission() (in module tardis.transport.montecarlo.interaction) bound_free_estimator_array2frame() (in module tardis.transport.montecarlo.estimators.util) bound_locked_sum_to_1() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) BOUNDARY (tardis.transport.montecarlo.r_packet.InteractionType attribute) BoundFreeOpacity (class in tardis.opacities.continuum.bound_free) BoundsError, [1] broadcast_ionization_energy (tardis.plasma.properties.ion_population.PhiSahaLTE attribute) build() (tardis.visualization.tools.convergence_plot.ConvergencePlots method)

C

calc_packet_energy() (in module tardis.transport.frame_transformations) calc_packet_energy_full_relativity() (in module tardis.transport.frame_transformations) calculate() (tardis.opacities.continuum.bound_free.BoundFreeOpacity method) (tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob.RawCollIonTransProbs method) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainIndex method) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainTransProbs method) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainTransProbsCollector method) (tardis.opacities.macro_atom.transition_probabilities.MonteCarloTransProbs method) (tardis.opacities.macro_atom.transition_probabilities.NonContinuumTransProbsMask method) (tardis.opacities.tau_sobolev.BetaSobolev method) (tardis.opacities.tau_sobolev.TauSobolev method) (tardis.plasma.equilibrium.rates.collision_strengths.CollDeexcRateCoeff method) (tardis.plasma.equilibrium.rates.collision_strengths.CollExcRateCoeff method) (tardis.plasma.properties.atomic.ContinuumInteractionHandler method) (tardis.plasma.properties.atomic.LevelIdxs2LineIdx method) (tardis.plasma.properties.atomic.LevelIdxs2TransitionIdx method) (tardis.plasma.properties.atomic.LinesLowerLevelIndex method) (tardis.plasma.properties.atomic.LinesUpperLevelIndex method) (tardis.plasma.properties.atomic.NLTEData method) (tardis.plasma.properties.atomic.PhotoIonizationData method) (tardis.plasma.properties.atomic.TwoPhotonData method) (tardis.plasma.properties.atomic.YgData method) (tardis.plasma.properties.atomic.YgInterpolator method) (tardis.plasma.properties.base.BaseAtomicDataProperty method) (tardis.plasma.properties.base.ProcessingPlasmaProperty method) (tardis.plasma.properties.continuum_processes.rates.AdiabaticCoolingRate method) (tardis.plasma.properties.continuum_processes.rates.CollDeexcRateCoeff method) (tardis.plasma.properties.continuum_processes.rates.CollExcRateCoeff method) (tardis.plasma.properties.continuum_processes.rates.CollIonRateCoeffSeaton method) (tardis.plasma.properties.continuum_processes.rates.CollRecombRateCoeff method) (tardis.plasma.properties.continuum_processes.rates.CorrPhotoIonRateCoeff method) (tardis.plasma.properties.continuum_processes.rates.FreeBoundCoolingRate method) (tardis.plasma.properties.continuum_processes.rates.FreeBoundEmissionCDF method) (tardis.plasma.properties.continuum_processes.rates.FreeFreeCoolingRate method) (tardis.plasma.properties.continuum_processes.rates.LevelNumberDensityLTE method) (tardis.plasma.properties.continuum_processes.rates.PhotoIonBoltzmannFactor static method) (tardis.plasma.properties.continuum_processes.rates.RawCollisionTransProbs method) (tardis.plasma.properties.continuum_processes.rates.RawPhotoIonTransProbs method) (tardis.plasma.properties.continuum_processes.rates.RawRecombTransProbs method) (tardis.plasma.properties.continuum_processes.rates.RawTwoPhotonTransProbs method) (tardis.plasma.properties.continuum_processes.rates.SpontRecombCoolingRateCoeff method) (tardis.plasma.properties.continuum_processes.rates.TwoPhotonEmissionCDF method) (tardis.plasma.properties.continuum_processes.rates.TwoPhotonFrequencySampler method) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.SpontRecombRateCoeff method) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.StimRecombRateCoeff method) (tardis.plasma.properties.general.BetaElectron method) (tardis.plasma.properties.general.BetaRadiation method) (tardis.plasma.properties.general.ElectronTemperature method) (tardis.plasma.properties.general.GElectron method) (tardis.plasma.properties.general.SelectedAtoms method) (tardis.plasma.properties.general.ThermalGElectron method) (tardis.plasma.properties.helium_nlte.HeliumNLTE static method) (tardis.plasma.properties.helium_nlte.HeliumNumericalNLTE method) (tardis.plasma.properties.ion_population.IonNumberDensity method) (tardis.plasma.properties.ion_population.IonNumberDensityHeNLTE method) (tardis.plasma.properties.ion_population.PhiSahaLTE static method) (tardis.plasma.properties.ion_population.PhiSahaNebular static method) (tardis.plasma.properties.ion_population.RadiationFieldCorrection method) (tardis.plasma.properties.ion_population.SahaFactor method) (tardis.plasma.properties.ion_population.ThermalPhiSahaLTE static method) (tardis.plasma.properties.level_population.LevelNumberDensity method) (tardis.plasma.properties.level_population.LevelNumberDensityHeNLTE method) (tardis.plasma.properties.nlte_rate_equation_solver.NLTEPopulationSolverLU method) (tardis.plasma.properties.nlte_rate_equation_solver.NLTEPopulationSolverRoot method) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorDiluteLTE method) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorLTE static method) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorNLTE method) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorNoNLTE static method) (tardis.plasma.properties.partition_function.PartitionFunction method) (tardis.plasma.properties.partition_function.ThermalLevelBoltzmannFactorLTE static method) (tardis.plasma.properties.partition_function.ThermalLTEPartitionFunction method) (tardis.plasma.properties.plasma_input.DilutionFactor method) (tardis.plasma.properties.plasma_input.TRadiative method) (tardis.plasma.properties.radiative_properties.RawRadBoundBoundTransProbs method) (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor method) (tardis.plasma.properties.rate_matrix_index.NLTEIndexHelper method) calculate_absorption_luminosities() (in module tardis.visualization.sdec.util) calculate_average_energies() (in module tardis.energy_input.gamma_ray_transport) calculate_average_power_per_mass() (in module tardis.energy_input.gamma_ray_transport) calculate_beta_sobolev() (in module tardis.opacities.tau_sobolev) calculate_cell_masses() (tardis.model.matter.composition.Composition method) calculate_collision_strengths() (tardis.plasma.equilibrium.rates.collisional_rates.ThermalCollisionalRateSolver method) calculate_departure_coefficients() (tardis.analysis.TARDISHistory method) calculate_distance_boundary() (in module tardis.transport.geometry.calculate_distances) calculate_distance_electron() (in module tardis.transport.geometry.calculate_distances) calculate_distance_line() (in module tardis.transport.geometry.calculate_distances) calculate_distance_line_full_relativity() (in module tardis.transport.geometry.calculate_distances) calculate_distance_radial() (in module tardis.energy_input.gamma_ray_grid) calculate_ejecta_velocity_volume() (in module tardis.energy_input.gamma_ray_transport) calculate_elemental_cell_masses() (tardis.model.matter.composition.Composition method) calculate_emission_luminosities() (in module tardis.visualization.sdec.util) calculate_energy_factors() (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) calculate_energy_per_mass() (in module tardis.energy_input.gamma_ray_transport) calculate_filtered_luminosity() (in module tardis.spectrum.luminosity) calculate_helium_one() (tardis.plasma.properties.helium_nlte.HeliumNLTE static method) calculate_helium_three() (tardis.plasma.properties.helium_nlte.HeliumNLTE static method) calculate_j_nu() (tardis.plasma.properties.continuum_processes.rates.TwoPhotonEmissionCDF static method) calculate_lu_solver_delta() (tardis.plasma.properties.nlte_rate_equation_solver.NLTEPopulationSolverLU static method) calculate_luminosity() (in module tardis.util.base) calculate_mass_fraction_at_time() (tardis.model.matter.composition.Composition method) calculate_mean_intensity() (tardis.plasma.radiation_field.planck_rad_field.DilutePlanckianRadiationField method) (tardis.plasma.radiation_field.planck_rad_field.PlanckianRadiationField method) calculate_mean_intensity_photo_ion_table() (tardis.transport.montecarlo.estimators.continuum_radfield_properties.DiluteBlackBodyContinuumPropertiesSolver method) calculate_mean_intensity_photoionization_df() (tardis.plasma.equilibrium.rates.photoionization_strengths.AnalyticPhotoionizationCoeffSolver method) calculate_p_values() (in module tardis.spectrum.formal_integral) (in module tardis.spectrum.formal_integral_cuda) calculate_photo_ionization_rate_coefficient() (tardis.transport.montecarlo.estimators.continuum_radfield_properties.DiluteBlackBodyContinuumPropertiesSolver method) calculate_photoionization_boltzmann_factor() (tardis.plasma.equilibrium.rates.photoionization_strengths.SpontaneousRecombinationCoeffSolver method) calculate_photoionization_rate_coeff() (tardis.plasma.equilibrium.rates.photoionization_strengths.AnalyticPhotoionizationCoeffSolver method) calculate_positron_fraction() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) calculate_radfield_luminosity() (tardis.transport.montecarlo.packet_source.BasePacketSource method) calculate_rate_matrix_index() (tardis.plasma.properties.rate_matrix_index.NLTEIndexHelper method) calculate_relative_lte_level_populations() (tardis.analysis.TARDISHistory method) calculate_sobolev_line_opacity() (in module tardis.opacities.tau_sobolev) calculate_spectrum() (tardis.spectrum.formal_integral.FormalIntegrator method) calculate_stimulated_recomb_rate_factor() (tardis.transport.montecarlo.estimators.continuum_radfield_properties.DiluteBlackBodyContinuumPropertiesSolver method) calculate_stimulated_recombination_rate_coeff() (tardis.plasma.equilibrium.rates.photoionization_strengths.AnalyticPhotoionizationCoeffSolver method) calculate_tau_electron() (in module tardis.opacities.opacities) calculate_total_decays() (in module tardis.energy_input.gamma_ray_channel) calculate_total_decays_old() (in module tardis.energy_input.gamma_ray_transport) calculate_upsilon_g_2_collisional_rates() (in module tardis.plasma.equilibrium.rates.collision_strengths) calculate_with_n_electron() (tardis.plasma.properties.ion_population.IonNumberDensity static method) calculate_yg_van_regemorter() (tardis.plasma.properties.atomic.YgData class method) calculate_z() (in module tardis.spectrum.formal_integral) calculate_z_cuda() (in module tardis.spectrum.formal_integral_cuda) cancel() (tardis.visualization.widgets.util.Timer method) check() (tardis.spectrum.formal_integral.FormalIntegrator method) check_continuum_interaction_species() (tardis.plasma.assembly.base.PlasmaSolverFactory method) check_convergence() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method)

check_equality() (in module tardis.io.util) check_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) checked_list (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget property) chi_bf (tardis.opacities.continuum.continuum_state.ContinuumState property) chi_bf_interpolator() (in module tardis.opacities.opacities) chi_continuum_calculator() (in module tardis.opacities.opacities) chi_electron_calculator() (in module tardis.opacities.opacities) chi_ff_calculator() (in module tardis.opacities.opacities) Chianti ChiantiCollisionData (class in tardis.io.atom_data.collision_data) class_type (tardis.energy_input.GXPacket.GXPacket attribute) (tardis.model.geometry.radial1d.NumbaRadial1DGeometry attribute) (tardis.opacities.opacity_state.OpacityStateNumba attribute) (tardis.transport.montecarlo.configuration.base.MonteCarloConfiguration attribute) (tardis.transport.montecarlo.estimators.radfield_mc_estimators.RadiationFieldMCEstimators attribute) (tardis.transport.montecarlo.numba_interface.OpacityState attribute) (tardis.transport.montecarlo.packet_collections.LastInteractionTracker attribute) (tardis.transport.montecarlo.packet_collections.PacketCollection attribute) (tardis.transport.montecarlo.packet_collections.VPacketCollection attribute) (tardis.transport.montecarlo.packet_trackers.RPacketLastInteractionTracker attribute) (tardis.transport.montecarlo.packet_trackers.RPacketTracker attribute) (tardis.transport.montecarlo.r_packet.RPacket attribute) (tardis.transport.montecarlo.vpacket.VPacket attribute) CMFGENCollisionData (class in tardis.io.atom_data.collision_data) CMFGENModel (class in tardis.io.model.readers.cmfgen) cns_representer() (in module tardis.io.configuration.config_reader) CollDeexcRateCoeff (class in tardis.plasma.equilibrium.rates.collision_strengths) (class in tardis.plasma.properties.continuum_processes.rates) CollExcRateCoeff (class in tardis.plasma.equilibrium.rates.collision_strengths) (class in tardis.plasma.properties.continuum_processes.rates) CollIonRateCoeffSeaton (class in tardis.plasma.properties.continuum_processes.rates) CollisionalCrossSections (class in tardis.plasma.equilibrium.rates.collision_strengths) CollisionalIonizationRateSolver (class in tardis.plasma.equilibrium.rates.collisional_ionization_rates) CollisionalIonizationSeaton (class in tardis.plasma.equilibrium.rates.collisional_ionization_strengths) CollRecombRateCoeff (class in tardis.plasma.properties.continuum_processes.rates) COLORS (tardis.io.logger.logger.LoggingConfig attribute) (tardis.visualization.widgets.line_info.LineInfoWidget attribute) common_prefactor (tardis.plasma.equilibrium.rates.photoionization_strengths.SpontaneousRecombinationCoeffSolver property) compile_rd_isotope_masses() (in module tardis.model.matter.composition) Composition (class in tardis.model.matter.composition) compton_emissivity_estimator() (in module tardis.energy_input.gamma_ray_estimators) compton_opacity_calculation() (in module tardis.opacities.opacities) compton_opacity_partial() (in module tardis.opacities.opacities) COMPTON_SCATTER (tardis.energy_input.GXPacket.GXPacketStatus attribute) compton_scatter() (in module tardis.energy_input.gamma_ray_interactions) compton_theta_distribution() (in module tardis.energy_input.util) compute_rates() (tardis.plasma.equilibrium.rates.photoionization_rates.AnalyticPhotoionizationRateSolver method) ConeProfile (class in tardis.io.model.readers.arepo) Configuration (class in tardis.io.configuration.config_reader) configuration_initialize() (in module tardis.transport.montecarlo.configuration.base) ConfigurationError, [1] ConfigurationNameSpace (class in tardis.io.configuration.config_reader) configure_logging() (tardis.io.logger.logger.TARDISLogger method) ConfigWriterMixin (class in tardis.io.configuration.config_reader) consolidate_vpacket_tracker() (in module tardis.transport.montecarlo.packet_collections) construct_quantity() (tardis.io.util.YAMLLoader method) continuum_event() (in module tardis.transport.montecarlo.interaction) continuum_interaction_species (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) continuum_interaction_species_multi_index (tardis.plasma.assembly.base.PlasmaSolverFactory property) CONTINUUM_PROCESS (tardis.transport.montecarlo.r_packet.InteractionType attribute) ContinuumInteractionHandler (class in tardis.plasma.properties.atomic) ContinuumInteractionSpecies (class in tardis.plasma.properties.plasma_input) ContinuumProperties (class in tardis.transport.montecarlo.estimators.continuum_radfield_properties) ContinuumState (class in tardis.opacities.continuum.continuum_state) convergence_plots (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow attribute) ConvergencePlots (class in tardis.visualization.tools.convergence_plot) ConvergenceSolver (class in tardis.simulation.convergence) convert_abundances_format() (in module tardis.util.base) convert_blondin_toymodel() (in module tardis.io.model.readers.blondin_toymodel) convert_element2nuclide_index() (tardis.model.matter.composition.Composition static method) convert_format() (in module tardis.scripts.cmfgen2tardis) convert_half_life_to_astropy_units() (in module tardis.energy_input.util) convert_species_to_multi_index() (in module tardis.plasma.assembly.base) convert_to_snake_case() (tardis.io.util.HDFWriterMixin static method) CorrPhotoIonRateCoeff (class in tardis.plasma.properties.continuum_processes.rates) create_energy_cdf() (in module tardis.energy_input.samplers) create_fields_dict() (tardis.visualization.widgets.custom_abundance.CustomYAML method) create_inventories_dict() (in module tardis.energy_input.gamma_ray_channel) create_inventories_dict_old() (in module tardis.energy_input.gamma_ray_transport) create_isotope_decay_df() (in module tardis.energy_input.gamma_ray_channel) create_isotope_dicts() (in module tardis.energy_input.gamma_ray_channel) create_isotope_dicts_old() (in module tardis.energy_input.gamma_ray_transport) create_output_widget() (in module tardis.io.logger.logger) create_packet_directions() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) create_packet_energies() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) (tardis.transport.montecarlo.packet_source.BasePacketSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSourceRelativistic method) (tardis.transport.montecarlo.weighted_packet_source.BlackBodyWeightedSource method) create_packet_mus() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) (tardis.transport.montecarlo.packet_source.BasePacketSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSourceRelativistic method) create_packet_nus() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) (tardis.transport.montecarlo.packet_source.BasePacketSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) (tardis.transport.montecarlo.weighted_packet_source.BlackBodyWeightedSource method) create_packet_radii() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) (tardis.transport.montecarlo.packet_source.BasePacketSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) create_packet_times_uniform_energy() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) create_packet_times_uniform_time() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) create_packets() (tardis.energy_input.gamma_ray_packet_source.GammaRayPacketSource method) (tardis.energy_input.gamma_ray_packet_source.RadioactivePacketSource method) (tardis.transport.montecarlo.packet_source.BasePacketSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSourceRelativistic method) create_plasma_plot() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) create_profile() (tardis.io.model.readers.arepo.ConeProfile method) (tardis.io.model.readers.arepo.FullProfile method) create_synpp_yaml() (in module tardis.util.base) create_t_inner_luminosities_plot() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) create_table_widget() (in module tardis.visualization.widgets.util) create_widgets() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) (tardis.visualization.widgets.custom_abundance.DensityEditor method) cuda_formal_integral() (in module tardis.spectrum.formal_integral_cuda) cuda_vector_integrator() (in module tardis.spectrum.formal_integral_cuda) CudaFormalIntegrator (class in tardis.spectrum.formal_integral_cuda) cumulative_integrate_array_by_blocks() (in module tardis.plasma.properties.continuum_processes.fast_array_util) CustomAbundanceWidget (class in tardis.visualization.widgets.custom_abundance) CustomAbundanceWidgetData (class in tardis.visualization.widgets.custom_abundance) CustomYAML (class in tardis.visualization.widgets.custom_abundance)

D

damped_converge() (tardis.simulation.convergence.ConvergenceSolver method) data (tardis.io.atom_data.collision_data.ChiantiCollisionData attribute) (tardis.io.atom_data.collision_data.CMFGENCollisionData attribute) (tardis.io.model.readers.cmfgen.CMFGENModel attribute) (tardis.io.model.readers.stella.STELLAModel attribute) DataFrameInput (class in tardis.plasma.properties.base) debounce() (in module tardis.visualization.widgets.util) decay() (tardis.model.matter.decay.IsotopicMassFraction method) decay_chain_energies() (in module tardis.energy_input.gamma_ray_transport) deepcopy() (tardis.io.configuration.config_reader.ConfigurationNameSpace method) DEFAULT_LEVEL (tardis.io.logger.logger.LoggingConfig attribute) DEFAULT_SPECIFIC_STATE (tardis.io.logger.logger.LoggingConfig attribute) delta_treatment (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) density (tardis.model.base.SimulationState property) DensityEditor (class in tardis.visualization.widgets.custom_abundance) deposition_estimator_kasen() (in module tardis.energy_input.gamma_ray_estimators) deprecated() (in module tardis.util.base) determine_bf_macro_activation_idx() (in module tardis.transport.montecarlo.interaction) determine_continuum_macro_activation_idx() (in module tardis.transport.montecarlo.interaction) dilute_blackbody_radiationfield_state (tardis.transport.montecarlo.estimators.base.EstimatedRadiationFieldProperties attribute) DiluteBlackBodyContinuumPropertiesSolver (class in tardis.transport.montecarlo.estimators.continuum_radfield_properties)

DilutePlanckianRadField (class in tardis.plasma.properties.plasma_input) DilutePlanckianRadiationField (class in tardis.plasma.radiation_field.planck_rad_field) dilution_factor (tardis.model.base.SimulationState property) DilutionFactor (class in tardis.plasma.properties.plasma_input) disable_line_scattering (tardis.opacities.opacity_solver.OpacitySolver attribute) display() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) (tardis.visualization.widgets.custom_abundance.DensityEditor method) (tardis.visualization.widgets.grotrian.GrotrianPlot method) (tardis.visualization.widgets.grotrian.GrotrianWidget method) (tardis.visualization.widgets.line_info.LineInfoWidget method) (tardis.visualization.widgets.shell_info.ShellInfoWidget method) dissociation_energies (tardis.io.atom_data.base.MoleculeData attribute) distance_trace() (in module tardis.energy_input.gamma_ray_grid) distribute_packets() (in module tardis.energy_input.gamma_ray_transport) doppler_factor_3d() (in module tardis.energy_input.util) doppler_factor_3D_all_packets() (in module tardis.energy_input.util) DOWNBRANCH (tardis.transport.montecarlo.numba_interface.LineInteractionType attribute) download_atom_data() (in module tardis.io.atom_data.atom_web_download) download_from_url() (in module tardis.io.util) dpd_dtype_eventhandler() (tardis.visualization.widgets.custom_abundance.DensityEditor method) dpd_shell_no_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) dtype_out (tardis.visualization.widgets.custom_abundance.DensityEditor attribute)

E

effective_element_masses (tardis.model.matter.composition.Composition property) einstein_coefficients (tardis.plasma.equilibrium.rates.radiative_rates.RadiativeRatesSolver attribute) ElectronEnergyDistribution (class in tardis.plasma.electron_energy_distribution.base) ElectronTemperature (class in tardis.plasma.properties.general) element_count() (tardis.visualization.widgets.shell_info.BaseShellInfo method) element_masses (tardis.model.matter.composition.Composition property) element_symbol2atomic_number() (in module tardis.util.base) elemental_mass_fraction (tardis.model.matter.composition.Composition property) elemental_number_density (tardis.model.base.SimulationState property) (tardis.model.matter.composition.Composition property) emissivities (tardis.opacities.continuum.continuum_state.ContinuumState property) emit() (tardis.io.logger.logger.AsyncEmitLogHandler method) EMITTED (tardis.transport.montecarlo.r_packet.PacketStatus attribute) emitted_packet_luminosity (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) emitted_packet_mask (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) emitted_packet_nu (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) enable_adiabatic_cooling (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) enable_two_photon_decay (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) enable_virtual_packet_logging (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow attribute) END (tardis.energy_input.GXPacket.GXPacketStatus attribute)

energy (tardis.plasma.electron_energy_distribution.base.ElectronEnergyDistribution attribute) equilibrium_constants (tardis.io.atom_data.base.MoleculeData attribute) error_view (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget attribute) ESCAPED (tardis.energy_input.GXPacket.GXPacketStatus attribute) ESCATTERING (tardis.transport.montecarlo.r_packet.InteractionType attribute) estimate_dilute_planck_radiation_field() (tardis.transport.montecarlo.estimators.mc_rad_field_solver.MCRadiationFieldPropertiesSolver method) estimate_jblues() (tardis.transport.montecarlo.estimators.mc_rad_field_solver.MCRadiationFieldPropertiesSolver method) estimate_t_inner() (tardis.simulation.base.Simulation method) estimate_v_inner() (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) EstimatedPhotoionizationCoeffSolver (class in tardis.plasma.equilibrium.rates.photoionization_strengths) EstimatedPhotoionizationRateSolver (class in tardis.plasma.equilibrium.rates.photoionization_rates) EstimatedRadiationFieldProperties (class in tardis.transport.montecarlo.estimators.base) euler_rodrigues() (in module tardis.energy_input.util) excitation_analytical_approximation (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) exp1_times_exp() (in module tardis.plasma.equilibrium.rates.collision_strengths) (tardis.plasma.properties.atomic.YgData static method) export() (tardis.io.model.readers.arepo.Profile method) export_convergence_plots (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow attribute) extend_with_default() (in module tardis.io.configuration.config_validator) extract_file_block() (in module tardis.scripts.cmfgen2tardis)

F

f_nu_to_f_lambda() (tardis.spectrum.spectrum.TARDISSpectrum method) fast_calculate_transition_probabilities() (in module tardis.opacities.macro_atom.util) fetch_data() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) FF_EMISSION (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) filter() (tardis.io.logger.logger.LogFilter method) filter_mode (tardis.visualization.widgets.grotrian.GrotrianPlot property) FILTER_MODES (tardis.visualization.widgets.grotrian.GrotrianPlot attribute) (tardis.visualization.widgets.line_info.LineInfoWidget attribute) FILTER_MODES_DESC (tardis.visualization.widgets.grotrian.GrotrianPlot attribute) (tardis.visualization.widgets.line_info.LineInfoWidget attribute) fix_bar_layout() (in module tardis.util.base) flux_lambda (tardis.spectrum.spectrum.TARDISSpectrum property) flux_nu (tardis.spectrum.spectrum.TARDISSpectrum property) formal_integral() (tardis.spectrum.formal_integral.FormalIntegrator method) (tardis.spectrum.formal_integral.NumbaFormalIntegrator method) (tardis.spectrum.formal_integral_cuda.CudaFormalIntegrator method) FormalIntegrator (class in tardis.spectrum.formal_integral) fractional_decay_energy() (in module tardis.energy_input.gamma_ray_transport) free_free_emission() (in module tardis.transport.montecarlo.interaction) FreeBoundCoolingRate (class in tardis.plasma.properties.continuum_processes.rates) FreeBoundEmissionCDF (class in tardis.plasma.properties.continuum_processes.rates) FreeFreeCoolingRate (class in tardis.plasma.properties.continuum_processes.rates) freeze() (tardis.plasma.base.BasePlasma method) from_axes() (tardis.grid.base.TardisGrid class method) from_config() (tardis.model.base.SimulationState class method) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorNLTE static method) (tardis.simulation.base.Simulation class method) (tardis.spectrum.base.SpectrumSolver class method) (tardis.transport.montecarlo.base.MonteCarloTransportSolver class method) from_config_dict() (tardis.io.configuration.config_reader.Configuration class method) (tardis.io.configuration.config_reader.ConfigurationNameSpace class method)

from_csvy() (tardis.model.base.SimulationState class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidgetData class method) from_hdf() (tardis.io.atom_data.base.AtomData class method) (tardis.visualization.tools.liv_plot.LIVPlotter class method) (tardis.visualization.tools.sdec_plot.SDECData class method) (tardis.visualization.tools.sdec_plot.SDECPlotter class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidgetData class method) from_inventories() (tardis.model.matter.decay.IsotopicMassFraction class method) from_legacy_plasma() (tardis.opacities.continuum.continuum_state.ContinuumState class method) (tardis.opacities.macro_atom.macroatom_state.MacroAtomState class method) (tardis.opacities.opacity_state.OpacityState class method) from_plasma() (tardis.opacities.opacity_state.OpacityState class method) from_simulation() (tardis.analysis.LastLineInteraction class method) (tardis.visualization.tools.liv_plot.LIVPlotter class method) (tardis.visualization.tools.rpacket_plot.RPacketPlotter class method) (tardis.visualization.tools.sdec_plot.SDECData class method) (tardis.visualization.tools.sdec_plot.SDECPlotter class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidgetData class method) (tardis.visualization.widgets.grotrian.GrotrianPlot class method) (tardis.visualization.widgets.grotrian.GrotrianWidget class method) (tardis.visualization.widgets.line_info.LineInfoWidget class method) from_simulation_state() (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource class method) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSourceRelativistic class method) from_yaml() (tardis.io.configuration.config_reader.Configuration class method) (tardis.io.configuration.config_reader.ConfigurationNameSpace class method) from_yml() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget class method) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidgetData class method) full_hdf_properties (tardis.io.util.HDFWriterMixin property) FullProfile (class in tardis.io.model.readers.arepo)

G

gamma_packet_loop() (in module tardis.energy_input.gamma_packet_loop) GammaRayPacketSource (class in tardis.energy_input.gamma_ray_packet_source) GElectron (class in tardis.plasma.properties.general) generate_abundance_density_plot() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) generate_numba_objects() (tardis.spectrum.formal_integral.FormalIntegrator method) generate_plot() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) generate_plot_mpl() (tardis.visualization.tools.liv_plot.LIVPlotter method) (tardis.visualization.tools.sdec_plot.SDECPlotter method) generate_plot_ply() (tardis.visualization.tools.liv_plot.LIVPlotter method) (tardis.visualization.tools.sdec_plot.SDECPlotter method) generate_rpacket_last_interaction_tracker_list() (in module tardis.transport.montecarlo.packet_trackers) generate_rpacket_tracker_list() (in module tardis.transport.montecarlo.packet_trackers) get_all_isotopes() (in module tardis.energy_input.energy_source) get_atomic_number() (in module tardis.scripts.cmfgen2tardis) get_atomic_repo_config() (in module tardis.io.atom_data.atom_web_download) get_attributes_from_store() (tardis.io.atom_data.base.AtomData method) get_average_compton_fraction() (in module tardis.energy_input.gamma_ray_estimators) get_chain_decay_power_per_ejectamass() (in module tardis.energy_input.gamma_ray_transport) get_collision_matrix() (tardis.io.atom_data.nlte_data.NLTEData method) get_compton_angle() (in module tardis.energy_input.gamma_ray_interactions) get_compton_fraction() (in module tardis.energy_input.gamma_ray_interactions) get_compton_fraction_artis() (in module tardis.energy_input.gamma_ray_interactions) get_compton_fraction_urilight() (in module tardis.energy_input.gamma_ray_interactions) get_config_item() (tardis.io.configuration.config_reader.ConfigurationNameSpace method) get_convergence_estimates() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) get_convergence_status() (tardis.simulation.convergence.ConvergenceSolver method) get_coordinates_multiple_packets() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) get_coordinates_with_theta_init() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) get_current_bound_free_continua() (in module tardis.opacities.opacities) get_current_line_id() (in module tardis.transport.montecarlo.interaction) get_data_dir() (in module tardis.io.configuration.config_internal) get_doppler_factor() (in module tardis.transport.frame_transformations) get_doppler_factor_full_relativity() (in module tardis.transport.frame_transformations) get_doppler_factor_partial_relativity() (in module tardis.transport.frame_transformations) get_effective_time_array() (in module tardis.energy_input.main_gamma_ray_loop) get_environment() (in module tardis.io.logger.logger) get_equal_array_size() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) get_frames() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) get_g_lower() (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor method) get_g_upper() (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor method) get_grids() (tardis.io.model.readers.arepo.ArepoSnapshot method)

get_index() (in module tardis.energy_input.util) get_internal_configuration() (in module tardis.io.configuration.config_internal) get_internal_data_path() (in module tardis.io.util) get_inverse_doppler_factor() (in module tardis.transport.frame_transformations) get_inverse_doppler_factor_full_relativity() (in module tardis.transport.frame_transformations) get_inverse_doppler_factor_partial_relativity() (in module tardis.transport.frame_transformations) get_isotope_string() (in module tardis.energy_input.energy_source) get_last_line_counts() (tardis.visualization.widgets.line_info.LineInfoWidget method) get_last_line_interaction() (tardis.analysis.TARDISHistory method) get_latex_label() (tardis.plasma.properties.base.BasePlasmaProperty method) get_metastable_upper() (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor method) get_mid_point_idx() (in module tardis.visualization.plot_util) get_middle_half_edges() (tardis.visualization.widgets.line_info.LineInfoWidget static method) get_nuclear_lines_database() (in module tardis.energy_input.energy_source) get_nuclide_atomic_number() (in module tardis.energy_input.gamma_ray_transport) get_packet_properties() (in module tardis.energy_input.main_gamma_ray_loop) get_perpendicular_vector() (in module tardis.energy_input.util) get_profiles() (tardis.io.model.readers.arepo.Profile method) get_properties() (tardis.io.configuration.config_reader.ConfigWriterMixin method) (tardis.io.util.HDFWriterMixin method) (tardis.io.util.PlasmaWriterMixin method) get_random_mu() (in module tardis.transport.montecarlo.utils) get_random_phi_photon() (in module tardis.energy_input.util) get_random_theta_photon() (in module tardis.energy_input.util) get_random_unit_vector() (in module tardis.energy_input.util) get_slider_steps() (tardis.visualization.tools.rpacket_plot.RPacketPlotter method) get_species_interactions() (tardis.visualization.widgets.line_info.LineInfoWidget method) get_symbols() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidgetData method) get_tau() (in module tardis.energy_input.energy_source) get_tau_integ() (in module tardis.workflows.util) get_taus() (in module tardis.energy_input.gamma_ray_transport) get_trivial_poisson_uncertainty() (in module tardis.stats.base) get_value() (tardis.plasma.base.BasePlasma method) get_zeta_values() (tardis.plasma.properties.ion_population.PhiSahaNebular static method) grid_row_to_config() (tardis.grid.base.TardisGrid method) grid_row_to_simulation_state() (tardis.grid.base.TardisGrid method) GrotrianPlot (class in tardis.visualization.widgets.grotrian) GrotrianWidget (class in tardis.visualization.widgets.grotrian) GROUP_MODES (tardis.visualization.widgets.line_info.LineInfoWidget attribute) GROUP_MODES_DESC (tardis.visualization.widgets.line_info.LineInfoWidget attribute) GXPacket (class in tardis.energy_input.GXPacket) GXPacketCollection (class in tardis.energy_input.GXPacket) GXPacketStatus (class in tardis.energy_input.GXPacket)

H

hdf_name (tardis.io.configuration.config_reader.Configuration attribute) (tardis.model.base.SimulationState attribute) (tardis.opacities.macro_atom.macroatom_state.MacroAtomState attribute) (tardis.plasma.base.BasePlasma attribute) (tardis.simulation.base.Simulation attribute) (tardis.spectrum.base.SpectrumSolver attribute) (tardis.transport.montecarlo.base.MonteCarloTransportSolver attribute) (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource attribute) (tardis.transport.montecarlo.weighted_packet_source.BlackBodyWeightedSource attribute) hdf_names (tardis.io.atom_data.base.AtomData attribute) hdf_properties (tardis.model.base.SimulationState attribute) (tardis.opacities.macro_atom.macroatom_state.MacroAtomState attribute) (tardis.simulation.base.Simulation attribute) (tardis.spectrum.base.SpectrumSolver attribute) (tardis.spectrum.spectrum.TARDISSpectrum attribute) (tardis.transport.montecarlo.base.MonteCarloTransportSolver attribute) (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource attribute) (tardis.transport.montecarlo.packet_source.BlackBodySimpleSourceRelativistic attribute) (tardis.transport.montecarlo.weighted_packet_source.BlackBodyWeightedSource attribute) (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow attribute)

HDFShellInfo (class in tardis.visualization.widgets.shell_info) HDFWriterMixin (class in tardis.io.util) heating_rate_data_file (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) helium_treatment (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) HeliumNLTE (class in tardis.plasma.properties.helium_nlte) HeliumNumericalNLTE (class in tardis.plasma.properties.helium_nlte) HeliumTreatment (class in tardis.plasma.properties.plasma_input) HiddenPlasmaProperty (class in tardis.plasma.properties.base) HomologousRadial1DGeometry (class in tardis.model.geometry.radial1d)

I

id_to_tuple() (tardis.model.matter.decay.IsotopicMassFraction static method) IN_PROCESS (tardis.energy_input.GXPacket.GXPacketStatus attribute) (tardis.transport.montecarlo.r_packet.PacketStatus attribute) IncompleteAtomicData initialize (tardis.opacities.macro_atom.macroatom_solver.MacroAtomSolver attribute) initialize_continuum_properties() (tardis.plasma.assembly.base.PlasmaSolverFactory method) initialize_convergence_plots() (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow method) initialize_estimator_statistics() (in module tardis.transport.montecarlo.estimators.radfield_mc_estimators) initialize_j_blues() (tardis.plasma.assembly.base.PlasmaSolverFactory method) initialize_last_interaction_tracker() (in module tardis.transport.montecarlo.packet_collections) initialize_packet_properties() (in module tardis.energy_input.GXPacket) initialize_packet_source() (in module tardis.io.model.parse_packet_source_configuration) initialize_spectrum_solver() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) initialize_transition_probabilities() (tardis.opacities.macro_atom.macroatom_solver.MacroAtomSolver method) initialize_transport_state() (tardis.transport.montecarlo.base.MonteCarloTransportSolver method) InnerVelocitySolverWorkflow (class in tardis.workflows.v_inner_solver) Input (class in tardis.plasma.properties.base) input_d_eventhandler() (tardis.visualization.widgets.custom_abundance.DensityEditor method) input_d_time_0_eventhandler() (tardis.visualization.widgets.custom_abundance.DensityEditor method) input_item_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) input_symb_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) input_v_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) inputs (tardis.plasma.properties.base.BaseAtomicDataProperty attribute) int_to_roman() (in module tardis.util.base) integrate_array_by_blocks() (in module tardis.transport.montecarlo.estimators.util) IntegrationError integrator (tardis.spectrum.base.SpectrumSolver property)

intensity_black_body() (in module tardis.spectrum.formal_integral) (in module tardis.util.base) intensity_black_body_cuda() (in module tardis.spectrum.formal_integral_cuda) intensity_ratio() (in module tardis.energy_input.energy_source) InteractionType (class in tardis.transport.montecarlo.r_packet) INTERNAL_DOWN (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) INTERNAL_UP (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) interpolate_integrator_quantities() (tardis.spectrum.formal_integral.FormalIntegrator method) ion_count() (tardis.visualization.widgets.shell_info.BaseShellInfo method) ion_number (tardis.analysis.LastLineInteraction property) (tardis.visualization.widgets.grotrian.GrotrianPlot property) ionization_analytical_approximation (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) IonizationData (class in tardis.plasma.properties.atomic) IonNumberDensity (class in tardis.plasma.properties.ion_population) IonNumberDensityHeNLTE (class in tardis.plasma.properties.ion_population) iron_group_fraction_per_shell() (in module tardis.energy_input.gamma_ray_transport) irs_shell_range_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) is_notebook() (in module tardis.util.base) is_quantity() (in module tardis.io.configuration.config_validator) is_valid_nuclide_or_elem() (in module tardis.util.base) is_zero_defined() (in module tardis.visualization.widgets.grotrian) IsotopeAbundance (class in tardis.plasma.properties.plasma_input) isotopic_mass_fraction (tardis.model.matter.composition.Composition property) isotopic_number_density (tardis.model.base.SimulationState property) (tardis.model.matter.composition.Composition property) IsotopicMassFraction (class in tardis.model.matter.decay) iterate() (tardis.simulation.base.Simulation method)

J

j_blue_estimator (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) j_blues (tardis.transport.montecarlo.estimators.base.EstimatedRadiationFieldProperties attribute)

j_estimator (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) JBlues (class in tardis.plasma.properties.plasma_input)

K

kappa_calculation() (in module tardis.opacities.opacities)

klein_nishina() (in module tardis.energy_input.util) kwargs (tardis.plasma.assembly.base.PlasmaSolverFactory attribute)

L

last_interaction_in_nu (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) last_interaction_in_r (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) last_interaction_type (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) last_line_interaction_in_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) last_line_interaction_out_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) last_line_interaction_shell_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) LastInteractionTracker (class in tardis.transport.montecarlo.packet_collections) LastLineInteraction (class in tardis.analysis) latex_formula (tardis.opacities.tau_sobolev.TauSobolev attribute) (tardis.plasma.properties.general.BetaElectron attribute) (tardis.plasma.properties.general.BetaRadiation attribute) (tardis.plasma.properties.general.ElectronTemperature attribute) (tardis.plasma.properties.general.GElectron attribute) (tardis.plasma.properties.general.ThermalGElectron attribute) (tardis.plasma.properties.ion_population.PhiSahaLTE attribute) (tardis.plasma.properties.ion_population.PhiSahaNebular attribute) (tardis.plasma.properties.ion_population.ThermalPhiSahaLTE attribute) (tardis.plasma.properties.level_population.LevelNumberDensity attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorDiluteLTE attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.partition_function.PartitionFunction attribute) (tardis.plasma.properties.partition_function.ThermalLevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor attribute) latex_name (tardis.opacities.continuum.bound_free.BoundFreeOpacity attribute) (tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob.RawCollIonTransProbs attribute) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainTransProbs attribute) (tardis.opacities.tau_sobolev.BetaSobolev attribute) (tardis.opacities.tau_sobolev.TauSobolev attribute) (tardis.plasma.equilibrium.rates.collision_strengths.CollDeexcRateCoeff attribute) (tardis.plasma.equilibrium.rates.collision_strengths.CollExcRateCoeff attribute) (tardis.plasma.properties.atomic.Levels attribute) (tardis.plasma.properties.atomic.Lines attribute) (tardis.plasma.properties.atomic.PhotoIonizationData attribute) (tardis.plasma.properties.atomic.YgData attribute) (tardis.plasma.properties.atomic.YgInterpolator attribute) (tardis.plasma.properties.continuum_processes.photo_ion_rate_coeff.PhotoIonRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.AdiabaticCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.BfHeatingRateCoeffEstimator attribute) (tardis.plasma.properties.continuum_processes.rates.CollDeexcRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CollExcRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CollIonRateCoeffSeaton attribute) (tardis.plasma.properties.continuum_processes.rates.CollRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CorrPhotoIonRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.FreeBoundCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.FreeBoundEmissionCDF attribute) (tardis.plasma.properties.continuum_processes.rates.FreeFreeCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.LevelNumberDensityLTE attribute) (tardis.plasma.properties.continuum_processes.rates.RawCollisionTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawPhotoIonTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawRecombTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.SpontRecombCoolingRateCoeff attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.SpontRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.StimRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.StimRecombRateFactor attribute) (tardis.plasma.properties.general.BetaElectron attribute) (tardis.plasma.properties.general.BetaRadiation attribute) (tardis.plasma.properties.general.ElectronTemperature attribute) (tardis.plasma.properties.general.GElectron attribute) (tardis.plasma.properties.general.ThermalGElectron attribute) (tardis.plasma.properties.ion_population.IonNumberDensity attribute) (tardis.plasma.properties.ion_population.IonNumberDensityHeNLTE attribute) (tardis.plasma.properties.ion_population.PhiSahaLTE attribute) (tardis.plasma.properties.ion_population.PhiSahaNebular attribute) (tardis.plasma.properties.ion_population.RadiationFieldCorrection attribute) (tardis.plasma.properties.ion_population.SahaFactor attribute) (tardis.plasma.properties.ion_population.ThermalPhiSahaLTE attribute) (tardis.plasma.properties.level_population.LevelNumberDensity attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorDiluteLTE attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.partition_function.PartitionFunction attribute) (tardis.plasma.properties.partition_function.ThermalLevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.partition_function.ThermalLTEPartitionFunction attribute) (tardis.plasma.properties.plasma_input.DilutionFactor attribute) (tardis.plasma.properties.plasma_input.JBlues attribute) (tardis.plasma.properties.plasma_input.LinkTRadTElectron attribute) (tardis.plasma.properties.plasma_input.NumberDensity attribute) (tardis.plasma.properties.plasma_input.TimeExplosion attribute) (tardis.plasma.properties.plasma_input.TRadiative attribute)

legacy_nlte_species (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) legacy_solve() (tardis.opacities.opacity_solver.OpacitySolver method) level_count() (tardis.visualization.widgets.shell_info.BaseShellInfo method) level_diff_threshold (tardis.visualization.widgets.grotrian.GrotrianPlot property) LevelBoltzmannFactorDiluteLTE (class in tardis.plasma.properties.partition_function) LevelBoltzmannFactorLTE (class in tardis.plasma.properties.partition_function) LevelBoltzmannFactorNLTE (class in tardis.plasma.properties.partition_function) LevelBoltzmannFactorNoNLTE (class in tardis.plasma.properties.partition_function) LevelIdxs2LineIdx (class in tardis.plasma.properties.atomic) LevelIdxs2TransitionIdx (class in tardis.plasma.properties.atomic) LevelNumberDensity (class in tardis.plasma.properties.level_population) LevelNumberDensityHeNLTE (class in tardis.plasma.properties.level_population) LevelNumberDensityLTE (class in tardis.plasma.properties.continuum_processes.rates) LevelPopulationSolver (class in tardis.plasma.equilibrium.level_populations) Levels (class in tardis.plasma.properties.atomic) LEVELS (tardis.io.logger.logger.LoggingConfig attribute) LINE (tardis.transport.montecarlo.r_packet.InteractionType attribute) line_emission() (in module tardis.transport.montecarlo.interaction) line_interaction_type (tardis.opacities.opacity_solver.OpacitySolver attribute) (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) line_scatter() (in module tardis.transport.montecarlo.interaction) line_search() (in module tardis.spectrum.formal_integral) line_search_cuda() (in module tardis.spectrum.formal_integral_cuda) LineInfoWidget (class in tardis.visualization.widgets.line_info) LineInteractionType (class in tardis.transport.montecarlo.numba_interface) Lines (class in tardis.plasma.properties.atomic) LinesLowerLevelIndex (class in tardis.plasma.properties.atomic) LinesUpperLevelIndex (class in tardis.plasma.properties.atomic) link_t_rad_t_electron (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) LinkTRadTElectron (class in tardis.plasma.properties.plasma_input) LIVPlotter (class in tardis.visualization.tools.liv_plot) load_atom_data() (tardis.analysis.TARDISHistory method) load_csv_from_csvy() (in module tardis.io.model.readers.csvy) load_csvy() (in module tardis.io.model.readers.csvy) load_ion_populations() (tardis.analysis.TARDISHistory method) load_jblues() (tardis.analysis.TARDISHistory method) load_level_populations() (tardis.analysis.TARDISHistory method) load_spectrum() (tardis.analysis.TARDISHistory method) load_t_inner() (tardis.analysis.TARDISHistory method) load_t_rads() (tardis.analysis.TARDISHistory method) load_ws() (tardis.analysis.TARDISHistory method) load_yaml_from_csvy() (in module tardis.io.model.readers.csvy) log_dataframe_console() (tardis.workflows.workflow_logging.WorkflowLogging method) log_dataframe_notebook() (tardis.workflows.workflow_logging.WorkflowLogging method) log_decorator() (in module tardis.io.logger.montecarlo_tracking) log_level (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow attribute) log_plasma_state() (tardis.simulation.base.Simulation method) (tardis.workflows.workflow_logging.WorkflowLogging method) log_run_results() (tardis.simulation.base.Simulation method) LogFilter (class in tardis.io.logger.logger) logging_state() (in module tardis.io.logger.logger) LoggingConfig (class in tardis.io.logger.logger) luminosity_to_flux() (tardis.spectrum.spectrum.TARDISSpectrum static method)

M

macro_atom() (in module tardis.transport.montecarlo.macro_atom) macro_atom_event() (in module tardis.transport.montecarlo.interaction) MACROATOM (tardis.transport.montecarlo.numba_interface.LineInteractionType attribute) MacroAtomData (class in tardis.io.atom_data.macro_atom_data) (class in tardis.plasma.properties.atomic) MacroAtomError MacroAtomSolver (class in tardis.opacities.macro_atom.macroatom_solver) MacroAtomState (class in tardis.opacities.macro_atom.macroatom_state) MacroAtomTransitionType (class in tardis.transport.montecarlo.macro_atom) main() (in module tardis.scripts.cmfgen2tardis) make_isotope_string_tardis_like() (in module tardis.energy_input.util) make_source_function() (tardis.spectrum.formal_integral.FormalIntegrator method) MalformedElementSymbolError MalformedError MalformedQuantityError MalformedSpeciesError map_species_from_string() (in module tardis.plasma.assembly.base) mapping_constructor() (tardis.io.util.YAMLLoader method) MarkovChainIndex (class in tardis.opacities.macro_atom.transition_probabilities) MarkovChainTransProbs (class in tardis.opacities.macro_atom.transition_probabilities) MarkovChainTransProbsCollector (class in tardis.opacities.macro_atom.transition_probabilities) mass_fractions (tardis.io.model.readers.artis.ArtisModelData attribute) match() (tardis.io.util.MockRegexPattern method) max_levels (tardis.visualization.widgets.grotrian.GrotrianPlot property) MAX_SEED_VAL (tardis.transport.montecarlo.packet_source.BasePacketSource attribute) max_wavelength (tardis.visualization.widgets.grotrian.GrotrianPlot property) MCContinuumPropertiesSolver (class in tardis.transport.montecarlo.estimators.continuum_radfield_properties) MCRadiationFieldPropertiesSolver (class in tardis.transport.montecarlo.estimators.mc_rad_field_solver) mean_density (tardis.io.model.readers.artis.ArtisModelData attribute) merge() (tardis.model.matter.decay.IsotopicMassFraction method) Meta-Stable metadata (tardis.io.model.readers.cmfgen.CMFGENModel attribute) (tardis.io.model.readers.stella.STELLAModel attribute) min_wavelength (tardis.visualization.widgets.grotrian.GrotrianPlot property) MockRegexPattern (class in tardis.io.util) module tardis tardis.analysis tardis.base tardis.constants tardis.energy_input tardis.energy_input.energy_source tardis.energy_input.gamma_packet_loop tardis.energy_input.gamma_ray_channel tardis.energy_input.gamma_ray_estimators tardis.energy_input.gamma_ray_grid tardis.energy_input.gamma_ray_interactions tardis.energy_input.gamma_ray_packet_source tardis.energy_input.gamma_ray_transport tardis.energy_input.GXPacket tardis.energy_input.main_gamma_ray_loop tardis.energy_input.samplers tardis.energy_input.util tardis.grid tardis.grid.base tardis.gui tardis.io tardis.io.atom_data tardis.io.atom_data.atom_web_download tardis.io.atom_data.base tardis.io.atom_data.collision_data tardis.io.atom_data.macro_atom_data tardis.io.atom_data.nlte_data tardis.io.atom_data.util tardis.io.configuration tardis.io.configuration.config_internal tardis.io.configuration.config_reader tardis.io.configuration.config_validator tardis.io.logger tardis.io.logger.logger tardis.io.logger.montecarlo_tracking tardis.io.model tardis.io.model.parse_atom_data tardis.io.model.parse_composition_configuration tardis.io.model.parse_packet_source_configuration tardis.io.model.parse_simulation_state tardis.io.model.readers tardis.io.model.readers.arepo tardis.io.model.readers.artis tardis.io.model.readers.base tardis.io.model.readers.blondin_toymodel tardis.io.model.readers.cmfgen tardis.io.model.readers.cmfgen_deprecated tardis.io.model.readers.csvy tardis.io.model.readers.generic_readers tardis.io.model.readers.stella tardis.io.model.readers.util tardis.io.util tardis.model tardis.model.base tardis.model.geometry tardis.model.geometry.radial1d tardis.model.matter tardis.model.matter.composition tardis.model.matter.decay tardis.opacities tardis.opacities.continuum tardis.opacities.continuum.bound_free tardis.opacities.continuum.continuum_state tardis.opacities.macro_atom tardis.opacities.macro_atom.continuum_processes tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob tardis.opacities.macro_atom.macroatom_solver tardis.opacities.macro_atom.macroatom_state tardis.opacities.macro_atom.transition_probabilities tardis.opacities.macro_atom.util tardis.opacities.opacities tardis.opacities.opacity_solver tardis.opacities.opacity_state tardis.opacities.tau_sobolev tardis.plasma tardis.plasma.assembly tardis.plasma.assembly.base tardis.plasma.assembly.legacy_assembly tardis.plasma.base tardis.plasma.electron_energy_distribution tardis.plasma.electron_energy_distribution.base tardis.plasma.equilibrium tardis.plasma.equilibrium.level_populations tardis.plasma.equilibrium.rate_matrix tardis.plasma.equilibrium.rates tardis.plasma.equilibrium.rates.collision_strengths tardis.plasma.equilibrium.rates.collisional_ionization_rates tardis.plasma.equilibrium.rates.collisional_ionization_strengths tardis.plasma.equilibrium.rates.collisional_rates tardis.plasma.equilibrium.rates.photoionization_rates tardis.plasma.equilibrium.rates.photoionization_strengths tardis.plasma.equilibrium.rates.radiative_rates tardis.plasma.exceptions tardis.plasma.properties tardis.plasma.properties.atomic tardis.plasma.properties.base tardis.plasma.properties.continuum_processes tardis.plasma.properties.continuum_processes.fast_array_util tardis.plasma.properties.continuum_processes.photo_ion_rate_coeff tardis.plasma.properties.continuum_processes.rates tardis.plasma.properties.continuum_processes.recomb_rate_coeff tardis.plasma.properties.general tardis.plasma.properties.helium_nlte tardis.plasma.properties.ion_population tardis.plasma.properties.legacy_property_collections tardis.plasma.properties.level_population tardis.plasma.properties.nlte tardis.plasma.properties.nlte_excitation_data tardis.plasma.properties.nlte_rate_equation_solver tardis.plasma.properties.partition_function tardis.plasma.properties.plasma_input tardis.plasma.properties.property_collections tardis.plasma.properties.radiative_properties tardis.plasma.properties.rate_matrix_index tardis.plasma.radiation_field tardis.plasma.radiation_field.planck_rad_field tardis.plasma.standard_plasmas tardis.scripts tardis.scripts.cmfgen2tardis tardis.simulation tardis.simulation.base tardis.simulation.convergence tardis.spectrum tardis.spectrum.base tardis.spectrum.formal_integral tardis.spectrum.formal_integral_cuda tardis.spectrum.luminosity tardis.spectrum.spectrum tardis.stats tardis.stats.base tardis.transport tardis.transport.frame_transformations tardis.transport.geometry tardis.transport.geometry.calculate_distances tardis.transport.montecarlo tardis.transport.montecarlo.base tardis.transport.montecarlo.configuration tardis.transport.montecarlo.configuration.base tardis.transport.montecarlo.configuration.constants tardis.transport.montecarlo.configuration.montecarlo_globals tardis.transport.montecarlo.estimators tardis.transport.montecarlo.estimators.base tardis.transport.montecarlo.estimators.continuum_radfield_properties tardis.transport.montecarlo.estimators.mc_rad_field_solver tardis.transport.montecarlo.estimators.radfield_estimator_calcs tardis.transport.montecarlo.estimators.radfield_mc_estimators tardis.transport.montecarlo.estimators.util tardis.transport.montecarlo.interaction tardis.transport.montecarlo.macro_atom tardis.transport.montecarlo.montecarlo_main_loop tardis.transport.montecarlo.montecarlo_transport_state tardis.transport.montecarlo.nonhomologous_grid tardis.transport.montecarlo.numba_interface tardis.transport.montecarlo.packet_collections tardis.transport.montecarlo.packet_source tardis.transport.montecarlo.packet_trackers tardis.transport.montecarlo.r_packet tardis.transport.montecarlo.r_packet_transport tardis.transport.montecarlo.single_packet_loop tardis.transport.montecarlo.utils tardis.transport.montecarlo.vpacket tardis.transport.montecarlo.weighted_packet_source tardis.util tardis.util.base tardis.visualization tardis.visualization.plot_util tardis.visualization.sdec tardis.visualization.sdec.util tardis.visualization.tools tardis.visualization.tools.convergence_plot tardis.visualization.tools.liv_plot tardis.visualization.tools.rpacket_plot tardis.visualization.tools.sdec_plot tardis.visualization.widgets tardis.visualization.widgets.custom_abundance tardis.visualization.widgets.grotrian tardis.visualization.widgets.line_info tardis.visualization.widgets.shell_info tardis.visualization.widgets.util tardis.workflows tardis.workflows.simple_tardis_workflow tardis.workflows.standard_tardis_workflow tardis.workflows.util tardis.workflows.v_inner_solver tardis.workflows.workflow_logging

MoleculeData (class in tardis.io.atom_data.base) montecarlo_emitted_luminosity (tardis.spectrum.base.SpectrumSolver property) montecarlo_main_loop() (in module tardis.transport.montecarlo.montecarlo_main_loop) montecarlo_reabsorbed_luminosity (tardis.spectrum.base.SpectrumSolver property) montecarlo_virtual_luminosity (tardis.spectrum.base.SpectrumSolver property) MonteCarloConfiguration (class in tardis.transport.montecarlo.configuration.base) MonteCarloException MonteCarloTransportSolver (class in tardis.transport.montecarlo.base) MonteCarloTransportState (class in tardis.transport.montecarlo.montecarlo_transport_state) MonteCarloTransProbs (class in tardis.opacities.macro_atom.transition_probabilities) move_packet() (in module tardis.energy_input.gamma_ray_grid) move_packet_across_shell_boundary() (in module tardis.transport.montecarlo.r_packet_transport) move_r_packet() (in module tardis.transport.montecarlo.r_packet_transport)

N

name (tardis.plasma.properties.base.BasePlasmaProperty property) nebular_ionization_delta_treatment (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) nlte_excitation_species (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) nlte_ionization_species (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) nlte_solver (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) NLTEData (class in tardis.io.atom_data.nlte_data) (class in tardis.plasma.properties.atomic) NLTEExcitationData (class in tardis.plasma.properties.nlte_excitation_data) NLTEExcitationSpecies (class in tardis.plasma.properties.plasma_input) NLTEIndexHelper (class in tardis.plasma.properties.rate_matrix_index) NLTEIonizationSpecies (class in tardis.plasma.properties.plasma_input) NLTEPopulationSolverLU (class in tardis.plasma.properties.nlte_rate_equation_solver) NLTEPopulationSolverRoot (class in tardis.plasma.properties.nlte_rate_equation_solver) no_of_elements (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget property) no_of_raw_shells (tardis.model.base.SimulationState property)

no_of_shells (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget property) no_of_shells_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) NonContinuumTransProbsMask (class in tardis.opacities.macro_atom.transition_probabilities) normalize (tardis.opacities.macro_atom.macroatom_solver.MacroAtomSolver attribute) normalize_vector() (in module tardis.energy_input.util) NotInitializedModule nu_bar_estimator (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) numba_cumulative_trapezoid() (in module tardis.plasma.properties.continuum_processes.fast_array_util) numba_formal_integral() (in module tardis.spectrum.formal_integral) NumbaFormalIntegrator (class in tardis.spectrum.formal_integral) NumbaRadial1DGeometry (class in tardis.model.geometry.radial1d) number_density (tardis.plasma.electron_energy_distribution.base.ThermalElectronEnergyDistribution attribute) NumberDensity (class in tardis.plasma.properties.plasma_input)

O

on_btn_add_element() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) on_btn_add_shell() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) on_btn_calculate() (tardis.visualization.widgets.custom_abundance.DensityEditor method) on_btn_next() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) on_btn_norm() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) on_btn_output() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) on_btn_prev() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) opacity_state_initialize() (in module tardis.opacities.opacity_state) (in module tardis.transport.montecarlo.numba_interface) OpacitySolver (class in tardis.opacities.opacity_solver) OpacityState (class in tardis.opacities.opacity_state) (class in tardis.transport.montecarlo.numba_interface) OpacityStateNumba (class in tardis.opacities.opacity_state) output_energy (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) output_nu (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) outputs (tardis.opacities.continuum.bound_free.BoundFreeOpacity attribute) (tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob.RawCollIonTransProbs attribute) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainIndex attribute) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainTransProbs attribute) (tardis.opacities.macro_atom.transition_probabilities.MarkovChainTransProbsCollector attribute) (tardis.opacities.macro_atom.transition_probabilities.MonteCarloTransProbs attribute) (tardis.opacities.macro_atom.transition_probabilities.NonContinuumTransProbsMask attribute) (tardis.opacities.tau_sobolev.BetaSobolev attribute) (tardis.opacities.tau_sobolev.TauSobolev attribute) (tardis.plasma.equilibrium.rates.collision_strengths.CollDeexcRateCoeff attribute) (tardis.plasma.equilibrium.rates.collision_strengths.CollExcRateCoeff attribute) (tardis.plasma.properties.atomic.ContinuumInteractionHandler attribute) (tardis.plasma.properties.atomic.IonizationData attribute) (tardis.plasma.properties.atomic.LevelIdxs2LineIdx attribute) (tardis.plasma.properties.atomic.LevelIdxs2TransitionIdx attribute) (tardis.plasma.properties.atomic.Levels attribute) (tardis.plasma.properties.atomic.Lines attribute) (tardis.plasma.properties.atomic.LinesLowerLevelIndex attribute) (tardis.plasma.properties.atomic.LinesUpperLevelIndex attribute) (tardis.plasma.properties.atomic.MacroAtomData attribute) (tardis.plasma.properties.atomic.NLTEData attribute) (tardis.plasma.properties.atomic.PhotoIonizationData attribute) (tardis.plasma.properties.atomic.TwoPhotonData attribute) (tardis.plasma.properties.atomic.YgData attribute) (tardis.plasma.properties.atomic.YgInterpolator attribute) (tardis.plasma.properties.atomic.ZetaData attribute) (tardis.plasma.properties.base.BasePlasmaProperty property) (tardis.plasma.properties.continuum_processes.photo_ion_rate_coeff.PhotoIonRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.AdiabaticCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.BfHeatingRateCoeffEstimator attribute) (tardis.plasma.properties.continuum_processes.rates.CollDeexcRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CollExcRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CollIonRateCoeffSeaton attribute) (tardis.plasma.properties.continuum_processes.rates.CollRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.CorrPhotoIonRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.FreeBoundCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.FreeBoundEmissionCDF attribute) (tardis.plasma.properties.continuum_processes.rates.FreeFreeCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.LevelNumberDensityLTE attribute) (tardis.plasma.properties.continuum_processes.rates.PhotoIonBoltzmannFactor attribute) (tardis.plasma.properties.continuum_processes.rates.RawCollisionTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawPhotoIonTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawRecombTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawTwoPhotonTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.SpontRecombCoolingRateCoeff attribute) (tardis.plasma.properties.continuum_processes.rates.StimRecombCoolingRateCoeffEstimator attribute) (tardis.plasma.properties.continuum_processes.rates.TwoPhotonEmissionCDF attribute) (tardis.plasma.properties.continuum_processes.rates.TwoPhotonFrequencySampler attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.SpontRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.StimRecombRateCoeff attribute) (tardis.plasma.properties.continuum_processes.recomb_rate_coeff.StimRecombRateFactor attribute) (tardis.plasma.properties.general.BetaElectron attribute) (tardis.plasma.properties.general.BetaRadiation attribute) (tardis.plasma.properties.general.ElectronTemperature attribute) (tardis.plasma.properties.general.GElectron attribute) (tardis.plasma.properties.general.SelectedAtoms attribute) (tardis.plasma.properties.general.ThermalGElectron attribute) (tardis.plasma.properties.helium_nlte.HeliumNLTE attribute) (tardis.plasma.properties.helium_nlte.HeliumNumericalNLTE attribute) (tardis.plasma.properties.ion_population.IonNumberDensity attribute) (tardis.plasma.properties.ion_population.IonNumberDensityHeNLTE attribute) (tardis.plasma.properties.ion_population.PhiSahaLTE attribute) (tardis.plasma.properties.ion_population.PhiSahaNebular attribute) (tardis.plasma.properties.ion_population.RadiationFieldCorrection attribute) (tardis.plasma.properties.ion_population.SahaFactor attribute) (tardis.plasma.properties.ion_population.ThermalPhiSahaLTE attribute) (tardis.plasma.properties.level_population.LevelNumberDensity attribute) (tardis.plasma.properties.nlte.PreviousBetaSobolev attribute) (tardis.plasma.properties.nlte.PreviousElectronDensities attribute) (tardis.plasma.properties.nlte_rate_equation_solver.NLTEPopulationSolverLU attribute) (tardis.plasma.properties.nlte_rate_equation_solver.NLTEPopulationSolverRoot attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorDiluteLTE attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorNLTE attribute) (tardis.plasma.properties.partition_function.LevelBoltzmannFactorNoNLTE attribute) (tardis.plasma.properties.partition_function.PartitionFunction attribute) (tardis.plasma.properties.partition_function.ThermalLevelBoltzmannFactorLTE attribute) (tardis.plasma.properties.partition_function.ThermalLTEPartitionFunction attribute) (tardis.plasma.properties.plasma_input.Abundance attribute) (tardis.plasma.properties.plasma_input.AtomicData attribute) (tardis.plasma.properties.plasma_input.ContinuumInteractionSpecies attribute) (tardis.plasma.properties.plasma_input.DilutePlanckianRadField attribute) (tardis.plasma.properties.plasma_input.DilutionFactor attribute) (tardis.plasma.properties.plasma_input.HeliumTreatment attribute) (tardis.plasma.properties.plasma_input.IsotopeAbundance attribute) (tardis.plasma.properties.plasma_input.JBlues attribute) (tardis.plasma.properties.plasma_input.LinkTRadTElectron attribute) (tardis.plasma.properties.plasma_input.NLTEExcitationSpecies attribute) (tardis.plasma.properties.plasma_input.NLTEIonizationSpecies attribute) (tardis.plasma.properties.plasma_input.NumberDensity attribute) (tardis.plasma.properties.plasma_input.TimeExplosion attribute) (tardis.plasma.properties.plasma_input.TRadiative attribute) (tardis.plasma.properties.radiative_properties.RawRadBoundBoundTransProbs attribute) (tardis.plasma.properties.radiative_properties.StimulatedEmissionFactor attribute) (tardis.plasma.properties.rate_matrix_index.NLTEIndexHelper attribute)

outputs_dict (tardis.plasma.base.BasePlasma attribute) override_plot_parameters() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) overwrite_existing_shells() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method)

P

packet_luminosity (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) PacketCollection (class in tardis.transport.montecarlo.packet_collections) packets_per_isotope() (in module tardis.energy_input.gamma_ray_transport) PacketStatus (class in tardis.transport.montecarlo.r_packet) PAIR_CREATION (tardis.energy_input.GXPacket.GXPacketStatus attribute) pair_creation_estimator() (in module tardis.energy_input.gamma_ray_estimators) pair_creation_opacity_artis() (in module tardis.opacities.opacities) pair_creation_opacity_calculation() (in module tardis.opacities.opacities) pair_creation_packet() (in module tardis.energy_input.gamma_ray_interactions) parse_atom_data() (in module tardis.io.model.parse_atom_data) parse_composition_from_config() (in module tardis.io.model.parse_composition_configuration) parse_composition_from_csvy() (in module tardis.io.model.parse_composition_configuration) parse_convergence_section() (tardis.io.configuration.config_reader.Configuration static method) parse_csv_mass_fractions() (in module tardis.io.model.readers.csvy) parse_file() (in module tardis.scripts.cmfgen2tardis) parse_packet_source_from_config() (in module tardis.io.model.parse_packet_source_configuration) parse_plasma_config() (tardis.plasma.assembly.base.PlasmaSolverFactory method) parse_quantity() (in module tardis.util.base) parse_simulation_state() (in module tardis.io.model.parse_simulation_state) partition_functions (tardis.io.atom_data.base.MoleculeData attribute) PartitionFunction (class in tardis.plasma.properties.partition_function) pdf() (tardis.energy_input.samplers.PositroniumSampler static method) PhiSahaLTE (class in tardis.plasma.properties.ion_population) PhiSahaNebular (class in tardis.plasma.properties.ion_population) phot_nus (tardis.opacities.continuum.continuum_state.ContinuumState property) photo_ion_activation_idx (tardis.opacities.continuum.continuum_state.ContinuumState property) photo_ion_block_references (tardis.opacities.continuum.continuum_state.ContinuumState property) photo_ion_nu_threshold_maxs (tardis.opacities.continuum.continuum_state.ContinuumState property) photo_ion_nu_threshold_mins (tardis.opacities.continuum.continuum_state.ContinuumState property) photo_ionization_rate_coefficient (tardis.transport.montecarlo.estimators.continuum_radfield_properties.ContinuumProperties attribute) PHOTOABSORPTION (tardis.energy_input.GXPacket.GXPacketStatus attribute) photoabsorption_opacity_calculation() (in module tardis.opacities.opacities) photoabsorption_opacity_calculation_kasen() (in module tardis.opacities.opacities) PhotoIonBoltzmannFactor (class in tardis.plasma.properties.continuum_processes.rates) PhotoIonizationData (class in tardis.plasma.properties.atomic) PhotoIonRateCoeff (class in tardis.plasma.properties.continuum_processes.photo_ion_rate_coeff) PlanckianRadiationField (class in tardis.plasma.radiation_field.planck_rad_field)

plasma_collection (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) plasma_modules (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) plasma_properties_dict (tardis.plasma.base.BasePlasma property) PlasmaConfigError PlasmaException PlasmaIonizationError PlasmaIsolatedModule PlasmaMissingModule PlasmaPropertyCollection (class in tardis.plasma.properties.legacy_property_collections) (class in tardis.plasma.properties.property_collections) PlasmaSolverFactory (class in tardis.plasma.assembly.base) PlasmaSolverSettings (class in tardis.plasma.base) PlasmaStateStorerMixin (class in tardis.simulation.base) PlasmaWriterMixin (class in tardis.io.util) plot() (tardis.spectrum.spectrum.TARDISSpectrum method) plot_profile() (tardis.io.model.readers.arepo.Profile method) plot_spectrum() (tardis.visualization.widgets.line_info.LineInfoWidget method) plot_wave_in_out() (tardis.analysis.LastLineInteraction method) populate_z() (in module tardis.spectrum.formal_integral) populate_z_cuda() (in module tardis.spectrum.formal_integral_cuda) positronium_continuum() (in module tardis.energy_input.energy_source) PositroniumSampler (class in tardis.energy_input.samplers) prepare_atom_data() (tardis.io.atom_data.base.AtomData method) prepare_continuum_interaction_data() (tardis.io.atom_data.base.AtomData method) prepare_factory() (tardis.plasma.assembly.base.PlasmaSolverFactory method) prepare_line_level_indexes() (tardis.io.atom_data.base.AtomData method) prepare_lines() (tardis.io.atom_data.base.AtomData method) prepare_macro_atom_data() (tardis.io.atom_data.base.AtomData method) PreviousBetaSobolev (class in tardis.plasma.properties.nlte) PreviousElectronDensities (class in tardis.plasma.properties.nlte) PreviousIterationProperty (class in tardis.plasma.properties.base) print_mask() (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) print_r_packet_properties() (in module tardis.transport.montecarlo.r_packet) process_packet_path() (in module tardis.energy_input.gamma_packet_loop) ProcessingPlasmaProperty (class in tardis.plasma.properties.base) Profile (class in tardis.io.model.readers.arepo) property_kwargs (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) property_mask (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow property)

Q

quantity_from_str() (in module tardis.io.util) quantity_linspace() (in module tardis.util.base)

quantity_representer() (in module tardis.io.configuration.config_reader) quartic_roots() (in module tardis.transport.montecarlo.nonhomologous_grid)

R

r_inner (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) r_inner_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) r_middle (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) r_middle_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) r_outer (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) r_outer_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) RadiationFieldCorrection (class in tardis.plasma.properties.ion_population) RadiationFieldMCEstimators (class in tardis.transport.montecarlo.estimators.radfield_mc_estimators) radiative_rates_type (tardis.plasma.assembly.base.PlasmaSolverFactory attribute) RADIATIVE_RATES_TYPE (tardis.plasma.base.PlasmaSolverSettings attribute) RadiativeRatesSolver (class in tardis.plasma.equilibrium.rates.radiative_rates) RadioactivePacketSource (class in tardis.energy_input.gamma_ray_packet_source) radius (tardis.model.base.SimulationState property) RateMatrix (class in tardis.plasma.equilibrium.rate_matrix) RawCollIonTransProbs (class in tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob) RawCollisionTransProbs (class in tardis.plasma.properties.continuum_processes.rates) RawPhotoIonTransProbs (class in tardis.plasma.properties.continuum_processes.rates) RawRadBoundBoundTransProbs (class in tardis.plasma.properties.radiative_properties) RawRecombTransProbs (class in tardis.plasma.properties.continuum_processes.rates) RawTwoPhotonTransProbs (class in tardis.plasma.properties.continuum_processes.rates) rbs_multi_apply_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) rbs_single_apply_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) REABSORBED (tardis.transport.montecarlo.r_packet.PacketStatus attribute) reabsorbed_packet_luminosity (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) reabsorbed_packet_nu (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) read_abundance() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) read_artis_density() (in module tardis.io.model.readers.artis) read_artis_lines() (in module tardis.energy_input.energy_source) read_artis_mass_fractions() (in module tardis.io.model.readers.artis) read_artis_model() (in module tardis.io.model.readers.artis) read_blondin_toymodel() (in module tardis.io.model.readers.blondin_toymodel) read_cmfgen_composition() (in module tardis.io.model.readers.cmfgen_deprecated) read_cmfgen_density() (in module tardis.io.model.readers.cmfgen_deprecated) read_cmfgen_model() (in module tardis.io.model.readers.cmfgen)

read_csv_composition() (in module tardis.io.model.readers.generic_readers) read_csv_isotope_mass_fractions() (in module tardis.io.model.readers.util) read_density() (tardis.visualization.widgets.custom_abundance.DensityEditor method) read_density_file() (in module tardis.io.model.readers.base) read_mass_fractions_file() (in module tardis.io.model.readers.base) read_simple_ascii_density() (in module tardis.io.model.readers.generic_readers) read_simple_ascii_mass_fractions() (in module tardis.io.model.readers.generic_readers) read_stella_model() (in module tardis.io.model.readers.stella) read_uniform_mass_fractions() (in module tardis.io.model.readers.generic_readers) rebin() (tardis.io.model.readers.arepo.Profile method) reformat_element_symbol() (in module tardis.util.base) refresh_packet_pbar() (in module tardis.util.base) related_groups (tardis.io.atom_data.base.AtomData attribute) remove_callback() (tardis.simulation.base.Simulation method) remove_hidden_properties() (tardis.plasma.base.BasePlasma method) reproject() (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) reset_selected_plot_wavelength_range() (tardis.visualization.widgets.grotrian.GrotrianPlot method) reshape_plasma_state_store() (tardis.simulation.base.PlasmaStateStorerMixin method) reshape_store_plasma_state() (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) resolve_atom_data_fname() (in module tardis.io.atom_data.util) reverse_binary_search() (in module tardis.spectrum.formal_integral) reverse_binary_search_cuda() (in module tardis.spectrum.formal_integral_cuda) roman_to_int() (in module tardis.util.base) RPacket (class in tardis.transport.montecarlo.r_packet) rpacket_trackers_to_dataframe() (in module tardis.transport.montecarlo.packet_trackers) RPacketLastInteractionTracker (class in tardis.transport.montecarlo.packet_trackers) RPacketPlotter (class in tardis.visualization.tools.rpacket_plot) RPacketTracker (class in tardis.transport.montecarlo.packet_trackers) run() (tardis.transport.montecarlo.base.MonteCarloTransportSolver method) (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) run_convergence() (tardis.simulation.base.Simulation method) run_final() (tardis.simulation.base.Simulation method) run_gamma_ray_loop() (in module tardis.energy_input.main_gamma_ray_loop) run_sim_from_grid() (tardis.grid.base.TardisGrid method) run_tardis() (in module tardis.base)

S

SahaFactor (class in tardis.plasma.properties.ion_population) sample_decay_time() (in module tardis.energy_input.samplers) sample_energy() (in module tardis.energy_input.samplers) (tardis.energy_input.samplers.PositroniumSampler method) sample_energy_distribution() (in module tardis.energy_input.samplers) sample_mass() (in module tardis.energy_input.samplers) sample_nu_free_bound() (in module tardis.transport.montecarlo.interaction) sample_nu_free_free() (in module tardis.transport.montecarlo.interaction) save_grid() (tardis.grid.base.TardisGrid method) SCATTER (tardis.transport.montecarlo.numba_interface.LineInteractionType attribute) scatter_type() (in module tardis.energy_input.gamma_ray_interactions) SDECData (class in tardis.visualization.tools.sdec_plot) SDECPlotter (class in tardis.visualization.tools.sdec_plot) SelectedAtoms (class in tardis.plasma.properties.general) set_config_item() (tardis.io.configuration.config_reader.ConfigurationNameSpace method) set_continuum_interaction_species_from_string() (tardis.plasma.assembly.base.PlasmaSolverFactory method) set_initial_value() (tardis.plasma.properties.nlte.PreviousBetaSobolev method) (tardis.plasma.properties.nlte.PreviousElectronDensities method) set_ion() (tardis.analysis.LastLineInteraction method) (tardis.visualization.widgets.grotrian.GrotrianPlot method) set_nlte_species_from_string() (tardis.plasma.assembly.base.PlasmaSolverFactory method) set_packet_props_full_relativity() (in module tardis.transport.montecarlo.single_packet_loop) set_packet_props_partial_relativity() (in module tardis.transport.montecarlo.single_packet_loop) set_temperature_from_luminosity() (tardis.transport.montecarlo.packet_source.BlackBodySimpleSource method) set_value() (tardis.plasma.properties.base.Input method) (tardis.plasma.properties.base.PreviousIterationProperty method) setup_analytical_approximations() (tardis.plasma.assembly.base.PlasmaSolverFactory method) setup_continuum_interactions() (tardis.plasma.assembly.base.PlasmaSolverFactory method) setup_electron_densities() (tardis.plasma.assembly.base.PlasmaSolverFactory method) setup_helium_treatment() (tardis.plasma.assembly.base.PlasmaSolverFactory method) setup_input_energy() (in module tardis.energy_input.energy_source) setup_legacy_nlte() (tardis.plasma.assembly.base.PlasmaSolverFactory method) setup_optional_spectra() (tardis.spectrum.base.SpectrumSolver method) setup_widget_logging() (tardis.io.logger.logger.TARDISLogger method) shell (tardis.analysis.LastLineInteraction property) (tardis.visualization.widgets.grotrian.GrotrianPlot property) shell_info_from_hdf() (in module tardis.visualization.widgets.shell_info) shell_info_from_simulation() (in module tardis.visualization.widgets.shell_info) shell_no (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget property) (tardis.visualization.widgets.custom_abundance.DensityEditor property) ShellInfoWidget (class in tardis.visualization.widgets.shell_info) shells_data() (tardis.visualization.widgets.shell_info.BaseShellInfo method) show_progress_bars (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow attribute) SimpleTARDISWorkflow (class in tardis.workflows.simple_tardis_workflow) Simulation (class in tardis.simulation.base) SimulationShellInfo (class in tardis.visualization.widgets.shell_info) SimulationState (class in tardis.model.base) single_packet_loop() (in module tardis.transport.montecarlo.single_packet_loop) solve() (tardis.opacities.macro_atom.macroatom_solver.MacroAtomSolver method) (tardis.opacities.opacity_solver.OpacitySolver method) (tardis.plasma.equilibrium.level_populations.LevelPopulationSolver method) (tardis.plasma.equilibrium.rate_matrix.RateMatrix method) (tardis.plasma.equilibrium.rates.collision_strengths.UpsilonChiantiSolver method) (tardis.plasma.equilibrium.rates.collision_strengths.UpsilonCMFGENSolver method) (tardis.plasma.equilibrium.rates.collision_strengths.UpsilonRegemorterSolver method) (tardis.plasma.equilibrium.rates.collisional_ionization_rates.CollisionalIonizationRateSolver method) (tardis.plasma.equilibrium.rates.collisional_ionization_strengths.CollisionalIonizationSeaton method) (tardis.plasma.equilibrium.rates.collisional_rates.ThermalCollisionalRateSolver method) (tardis.plasma.equilibrium.rates.photoionization_rates.AnalyticPhotoionizationRateSolver method) (tardis.plasma.equilibrium.rates.photoionization_rates.EstimatedPhotoionizationRateSolver method) (tardis.plasma.equilibrium.rates.photoionization_strengths.AnalyticPhotoionizationCoeffSolver method) (tardis.plasma.equilibrium.rates.photoionization_strengths.EstimatedPhotoionizationCoeffSolver method) (tardis.plasma.equilibrium.rates.photoionization_strengths.SpontaneousRecombinationCoeffSolver method) (tardis.plasma.equilibrium.rates.radiative_rates.RadiativeRatesSolver method) (tardis.spectrum.base.SpectrumSolver method) (tardis.transport.montecarlo.estimators.continuum_radfield_properties.DiluteBlackBodyContinuumPropertiesSolver method) (tardis.transport.montecarlo.estimators.continuum_radfield_properties.MCContinuumPropertiesSolver method) (tardis.transport.montecarlo.estimators.mc_rad_field_solver.MCRadiationFieldPropertiesSolver method)

solve_collisional_cross_sections() (tardis.plasma.equilibrium.rates.collision_strengths.CollisionalCrossSections method) solve_montecarlo() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) solve_opacity() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) solve_plasma() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) solve_quadratic_equation() (in module tardis.energy_input.util) solve_quadratic_equation_expanding() (in module tardis.energy_input.util) solve_simulation_state() (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) solve_transition_probabilities() (tardis.opacities.macro_atom.macroatom_solver.MacroAtomSolver method) species_string_to_tuple() (in module tardis.util.base) species_tuple_to_string() (in module tardis.util.base) specific_log_level (tardis.workflows.simple_tardis_workflow.SimpleTARDISWorkflow attribute) spectrum_integrated (tardis.spectrum.base.SpectrumSolver property) spectrum_real_packets (tardis.spectrum.base.SpectrumSolver property) spectrum_real_packets_reabsorbed (tardis.spectrum.base.SpectrumSolver property) spectrum_virtual_packets (tardis.spectrum.base.SpectrumSolver property) SpectrumSolver (class in tardis.spectrum.base) spherical_to_cartesian() (in module tardis.energy_input.util) SpontaneousRecombinationCoeffSolver (class in tardis.plasma.equilibrium.rates.photoionization_strengths) SpontRecombCoolingRateCoeff (class in tardis.plasma.properties.continuum_processes.rates) SpontRecombRateCoeff (class in tardis.plasma.properties.continuum_processes.recomb_rate_coeff) standardize() (in module tardis.visualization.widgets.grotrian) StandardTARDISWorkflow (class in tardis.workflows.standard_tardis_workflow) start() (tardis.visualization.widgets.util.Timer method) STELLAModel (class in tardis.io.model.readers.stella) StimRecombCoolingRateCoeffEstimator (class in tardis.plasma.properties.continuum_processes.rates) StimRecombRateCoeff (class in tardis.plasma.properties.continuum_processes.recomb_rate_coeff) StimRecombRateFactor (class in tardis.plasma.properties.continuum_processes.recomb_rate_coeff) stimulated_recombination_rate_factor (tardis.transport.montecarlo.estimators.continuum_radfield_properties.ContinuumProperties attribute) StimulatedEmissionFactor (class in tardis.plasma.properties.radiative_properties) store_plasma_state() (tardis.simulation.base.PlasmaStateStorerMixin method) (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow method) store_previous_properties() (tardis.plasma.base.BasePlasma method) Synapps

T

t_inner (tardis.model.base.SimulationState property) t_radiative (tardis.model.base.SimulationState property) TableSummaryLabel (class in tardis.visualization.widgets.util) tardis module tardis.analysis module tardis.base module tardis.constants module tardis.energy_input module tardis.energy_input.energy_source module tardis.energy_input.gamma_packet_loop module tardis.energy_input.gamma_ray_channel module tardis.energy_input.gamma_ray_estimators module tardis.energy_input.gamma_ray_grid module tardis.energy_input.gamma_ray_interactions module tardis.energy_input.gamma_ray_packet_source module tardis.energy_input.gamma_ray_transport module tardis.energy_input.GXPacket module tardis.energy_input.main_gamma_ray_loop module tardis.energy_input.samplers module tardis.energy_input.util module tardis.grid module tardis.grid.base module tardis.gui module tardis.io module tardis.io.atom_data module tardis.io.atom_data.atom_web_download module tardis.io.atom_data.base module tardis.io.atom_data.collision_data module tardis.io.atom_data.macro_atom_data module tardis.io.atom_data.nlte_data module tardis.io.atom_data.util module tardis.io.configuration module tardis.io.configuration.config_internal module tardis.io.configuration.config_reader module tardis.io.configuration.config_validator module tardis.io.logger module tardis.io.logger.logger module tardis.io.logger.montecarlo_tracking module tardis.io.model module tardis.io.model.parse_atom_data module tardis.io.model.parse_composition_configuration module tardis.io.model.parse_packet_source_configuration module tardis.io.model.parse_simulation_state module tardis.io.model.readers module tardis.io.model.readers.arepo module tardis.io.model.readers.artis module tardis.io.model.readers.base module tardis.io.model.readers.blondin_toymodel module tardis.io.model.readers.cmfgen module tardis.io.model.readers.cmfgen_deprecated module tardis.io.model.readers.csvy module tardis.io.model.readers.generic_readers module tardis.io.model.readers.stella module tardis.io.model.readers.util module tardis.io.util module tardis.model module tardis.model.base module tardis.model.geometry module tardis.model.geometry.radial1d module tardis.model.matter module tardis.model.matter.composition module tardis.model.matter.decay module tardis.opacities module tardis.opacities.continuum module tardis.opacities.continuum.bound_free module tardis.opacities.continuum.continuum_state module tardis.opacities.macro_atom module tardis.opacities.macro_atom.continuum_processes module tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob module tardis.opacities.macro_atom.macroatom_solver module tardis.opacities.macro_atom.macroatom_state module tardis.opacities.macro_atom.transition_probabilities module tardis.opacities.macro_atom.util module tardis.opacities.opacities module tardis.opacities.opacity_solver module tardis.opacities.opacity_state module tardis.opacities.tau_sobolev module tardis.plasma module tardis.plasma.assembly module tardis.plasma.assembly.base module tardis.plasma.assembly.legacy_assembly module tardis.plasma.base module tardis.plasma.electron_energy_distribution module tardis.plasma.electron_energy_distribution.base module tardis.plasma.equilibrium module tardis.plasma.equilibrium.level_populations module tardis.plasma.equilibrium.rate_matrix module tardis.plasma.equilibrium.rates module tardis.plasma.equilibrium.rates.collision_strengths module tardis.plasma.equilibrium.rates.collisional_ionization_rates module tardis.plasma.equilibrium.rates.collisional_ionization_strengths module tardis.plasma.equilibrium.rates.collisional_rates module tardis.plasma.equilibrium.rates.photoionization_rates module tardis.plasma.equilibrium.rates.photoionization_strengths module tardis.plasma.equilibrium.rates.radiative_rates module tardis.plasma.exceptions module tardis.plasma.properties module tardis.plasma.properties.atomic module tardis.plasma.properties.base module tardis.plasma.properties.continuum_processes module tardis.plasma.properties.continuum_processes.fast_array_util module tardis.plasma.properties.continuum_processes.photo_ion_rate_coeff module tardis.plasma.properties.continuum_processes.rates module tardis.plasma.properties.continuum_processes.recomb_rate_coeff module tardis.plasma.properties.general module tardis.plasma.properties.helium_nlte module tardis.plasma.properties.ion_population module tardis.plasma.properties.legacy_property_collections module tardis.plasma.properties.level_population module tardis.plasma.properties.nlte module

tardis.plasma.properties.nlte_excitation_data module tardis.plasma.properties.nlte_rate_equation_solver module tardis.plasma.properties.partition_function module tardis.plasma.properties.plasma_input module tardis.plasma.properties.property_collections module tardis.plasma.properties.radiative_properties module tardis.plasma.properties.rate_matrix_index module tardis.plasma.radiation_field module tardis.plasma.radiation_field.planck_rad_field module tardis.plasma.standard_plasmas module tardis.scripts module tardis.scripts.cmfgen2tardis module tardis.simulation module tardis.simulation.base module tardis.simulation.convergence module tardis.spectrum module tardis.spectrum.base module tardis.spectrum.formal_integral module tardis.spectrum.formal_integral_cuda module tardis.spectrum.luminosity module tardis.spectrum.spectrum module tardis.stats module tardis.stats.base module tardis.transport module tardis.transport.frame_transformations module tardis.transport.geometry module tardis.transport.geometry.calculate_distances module tardis.transport.montecarlo module tardis.transport.montecarlo.base module tardis.transport.montecarlo.configuration module tardis.transport.montecarlo.configuration.base module tardis.transport.montecarlo.configuration.constants module tardis.transport.montecarlo.configuration.montecarlo_globals module tardis.transport.montecarlo.estimators module tardis.transport.montecarlo.estimators.base module tardis.transport.montecarlo.estimators.continuum_radfield_properties module tardis.transport.montecarlo.estimators.mc_rad_field_solver module tardis.transport.montecarlo.estimators.radfield_estimator_calcs module tardis.transport.montecarlo.estimators.radfield_mc_estimators module tardis.transport.montecarlo.estimators.util module tardis.transport.montecarlo.interaction module tardis.transport.montecarlo.macro_atom module tardis.transport.montecarlo.montecarlo_main_loop module tardis.transport.montecarlo.montecarlo_transport_state module tardis.transport.montecarlo.nonhomologous_grid module tardis.transport.montecarlo.numba_interface module tardis.transport.montecarlo.packet_collections module tardis.transport.montecarlo.packet_source module tardis.transport.montecarlo.packet_trackers module tardis.transport.montecarlo.r_packet module tardis.transport.montecarlo.r_packet_transport module tardis.transport.montecarlo.single_packet_loop module tardis.transport.montecarlo.utils module tardis.transport.montecarlo.vpacket module tardis.transport.montecarlo.weighted_packet_source module tardis.util module tardis.util.base module tardis.visualization module tardis.visualization.plot_util module tardis.visualization.sdec module tardis.visualization.sdec.util module tardis.visualization.tools module tardis.visualization.tools.convergence_plot module tardis.visualization.tools.liv_plot module tardis.visualization.tools.rpacket_plot module tardis.visualization.tools.sdec_plot module tardis.visualization.widgets module tardis.visualization.widgets.custom_abundance module tardis.visualization.widgets.grotrian module tardis.visualization.widgets.line_info module tardis.visualization.widgets.shell_info module tardis.visualization.widgets.util module tardis.workflows module tardis.workflows.simple_tardis_workflow module tardis.workflows.standard_tardis_workflow module tardis.workflows.util module tardis.workflows.v_inner_solver module tardis.workflows.workflow_logging module TardisGrid (class in tardis.grid.base) TARDISHistory (class in tardis.analysis) TARDISLogger (class in tardis.io.logger.logger) TARDISSpectrum (class in tardis.spectrum.spectrum) tau_sobolev_factor() (in module tardis.transport.montecarlo.nonhomologous_grid) TAU_TARGET (tardis.workflows.v_inner_solver.InnerVelocitySolverWorkflow attribute) TauSobolev (class in tardis.opacities.tau_sobolev) tbs_scale_eventhandler() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) temperature (tardis.plasma.electron_energy_distribution.base.ThermalElectronEnergyDistribution attribute) temperature_kelvin (tardis.plasma.radiation_field.planck_rad_field.DilutePlanckianRadiationField property) (tardis.plasma.radiation_field.planck_rad_field.PlanckianRadiationField property) temperatures (tardis.io.atom_data.collision_data.ChiantiCollisionData attribute) (tardis.io.atom_data.collision_data.CMFGENCollisionData attribute) thaw() (tardis.plasma.base.BasePlasma method) ThermalCollisionalRateSolver (class in tardis.plasma.equilibrium.rates.collisional_rates) ThermalElectronEnergyDistribution (class in tardis.plasma.electron_energy_distribution.base) ThermalGElectron (class in tardis.plasma.properties.general) ThermalLevelBoltzmannFactorLTE (class in tardis.plasma.properties.partition_function) ThermalLTEPartitionFunction (class in tardis.plasma.properties.partition_function) ThermalPhiSahaLTE (class in tardis.plasma.properties.ion_population) thomson_scatter() (in module tardis.transport.montecarlo.interaction) time_evolve_cumulative_decay() (in module tardis.energy_input.gamma_ray_channel) time_evolve_mass_fraction() (in module tardis.energy_input.gamma_ray_channel) time_of_model (tardis.io.model.readers.artis.ArtisModelData attribute) time_of_simulation (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) TimeExplosion (class in tardis.plasma.properties.plasma_input) Timer (class in tardis.visualization.widgets.util) to_ascii() (tardis.spectrum.spectrum.TARDISSpectrum method) to_csvy() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) to_geometry() (tardis.io.model.readers.artis.ArtisModelData method) to_hdf() (tardis.io.util.HDFWriterMixin method) (tardis.io.util.PlasmaWriterMixin method) to_hdf_util() (tardis.io.util.HDFWriterMixin static method) to_inventories() (tardis.model.matter.decay.IsotopicMassFraction method) to_numba() (tardis.model.geometry.radial1d.HomologousRadial1DGeometry method) (tardis.opacities.opacity_state.OpacityState method) to_planckian_radiation_field() (tardis.plasma.radiation_field.planck_rad_field.DilutePlanckianRadiationField method) to_rgb255_string() (in module tardis.visualization.plot_util) TOML trace_packet() (in module tardis.transport.montecarlo.r_packet_transport) trace_vpacket() (in module tardis.transport.montecarlo.vpacket) trace_vpacket_volley() (in module tardis.transport.montecarlo.vpacket) trace_vpacket_within_shell() (in module tardis.transport.montecarlo.vpacket) TRadiative (class in tardis.plasma.properties.plasma_input) transition_colors() (in module tardis.visualization.tools.convergence_plot) transition_probabilities_outputs (tardis.opacities.macro_atom.continuum_processes.collisional_ion_trans_prob.RawCollIonTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.AdiabaticCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.FreeBoundCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.FreeFreeCoolingRate attribute) (tardis.plasma.properties.continuum_processes.rates.RawCollisionTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawPhotoIonTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawRecombTransProbs attribute) (tardis.plasma.properties.continuum_processes.rates.RawTwoPhotonTransProbs attribute) (tardis.plasma.properties.radiative_properties.RawRadBoundBoundTransProbs attribute) transition_probability_data (tardis.io.atom_data.macro_atom_data.MacroAtomData attribute) trapezoid_integration() (in module tardis.spectrum.formal_integral) trapezoid_integration_cuda() (in module tardis.spectrum.formal_integral_cuda) traverse_configs() (in module tardis.io.util) TWO_PHOTON (tardis.transport.montecarlo.macro_atom.MacroAtomTransitionType attribute) TwoPhotonData (class in tardis.plasma.properties.atomic) TwoPhotonEmissionCDF (class in tardis.plasma.properties.continuum_processes.rates) TwoPhotonFrequencySampler (class in tardis.plasma.properties.continuum_processes.rates)

U

ui_control_description() (tardis.visualization.widgets.line_info.LineInfoWidget static method) update() (tardis.plasma.base.BasePlasma method) (tardis.plasma.properties.base.ProcessingPlasmaProperty method) (tardis.visualization.tools.convergence_plot.ConvergencePlots method) update_abundance_plot() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) update_and_resize() (tardis.visualization.widgets.util.TableSummaryLabel method) update_bar_diagonal() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) update_base_estimators() (in module tardis.transport.montecarlo.estimators.radfield_estimator_calcs) update_bound_free_estimators() (in module tardis.transport.montecarlo.estimators.radfield_estimator_calcs) update_convergence_plot_data() (tardis.workflows.standard_tardis_workflow.StandardTARDISWorkflow method) update_density_plot() (tardis.visualization.widgets.custom_abundance.DensityEditor method) update_element_count_table() (tardis.visualization.widgets.shell_info.ShellInfoWidget method) update_front_end() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) update_he_population() (tardis.plasma.properties.ion_population.IonNumberDensityHeNLTE method)

update_input_item_value() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) update_ion_count_table() (tardis.visualization.widgets.shell_info.ShellInfoWidget method) update_iterations_pbar() (in module tardis.util.base) update_last_interaction_filter() (tardis.analysis.LastLineInteraction method) update_level_count_table() (tardis.visualization.widgets.shell_info.ShellInfoWidget method) update_line_color() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) update_line_estimators() (in module tardis.transport.montecarlo.estimators.radfield_estimator_calcs) update_packet_pbar() (in module tardis.util.base) update_plasma_plots() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) update_t_inner_luminosities_plot() (tardis.visualization.tools.convergence_plot.ConvergencePlots method) upsilon_scaling() (tardis.plasma.equilibrium.rates.collision_strengths.UpsilonChiantiSolver method) UpsilonChiantiSolver (class in tardis.plasma.equilibrium.rates.collision_strengths) UpsilonCMFGENSolver (class in tardis.plasma.equilibrium.rates.collision_strengths) UpsilonRegemorterSolver (class in tardis.plasma.equilibrium.rates.collision_strengths)

V

v_inner (tardis.model.base.SimulationState property) v_inner_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) v_inner_boundary (tardis.model.base.SimulationState property) v_inner_boundary_index (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) v_middle (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) v_middle_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) v_outer (tardis.model.base.SimulationState property) v_outer_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) v_outer_boundary (tardis.model.base.SimulationState property) v_outer_boundary_index (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) validate_dict() (in module tardis.io.configuration.config_validator) validate_model_section() (tardis.io.configuration.config_reader.Configuration static method) validate_montecarlo_section() (tardis.io.configuration.config_reader.Configuration static method) validate_spectrum_section() (tardis.io.configuration.config_reader.Configuration static method) validate_yaml() (in module tardis.io.configuration.config_validator) velocity (tardis.io.model.readers.artis.ArtisModelData attribute) (tardis.model.base.SimulationState property)

velocity_dvdr() (in module tardis.transport.montecarlo.nonhomologous_grid) virt_logging (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) virt_packet_energies (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_initial_mus (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_initial_rs (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_interaction_in_nu (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_interaction_in_r (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_interaction_type (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_line_interaction_in_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_line_interaction_out_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_last_line_interaction_shell_id (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virt_packet_nus (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) virtual_packet_luminosity (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState property) volume (tardis.model.base.SimulationState property) (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) volume_active (tardis.model.geometry.radial1d.HomologousRadial1DGeometry property) VPacket (class in tardis.transport.montecarlo.vpacket) vpacket_hdf_properties (tardis.transport.montecarlo.montecarlo_transport_state.MonteCarloTransportState attribute) VPacketCollection (class in tardis.transport.montecarlo.packet_collections)

W

w_epsilon (tardis.transport.montecarlo.estimators.mc_rad_field_solver.MCRadiationFieldPropertiesSolver attribute) wavelength_end (tardis.analysis.LastLineInteraction property) wavelength_start (tardis.analysis.LastLineInteraction property) WorkflowLogging (class in tardis.workflows.workflow_logging)

write_csv_portion() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method) write_to_dot() (tardis.plasma.base.BasePlasma method) write_to_tex() (tardis.plasma.base.BasePlasma method) write_yaml_portion() (tardis.visualization.widgets.custom_abundance.CustomAbundanceWidget method)

X

x_sect (tardis.opacities.continuum.continuum_state.ContinuumState property)

Y

y_scale (tardis.visualization.widgets.grotrian.GrotrianPlot property) Y_SCALE_OPTION (tardis.visualization.widgets.grotrian.GrotrianPlot attribute) YAML

yaml_load_file() (in module tardis.io.util) YAMLLoader (class in tardis.io.util) YgData (class in tardis.plasma.properties.atomic) YgInterpolator (class in tardis.plasma.properties.atomic)

Z

ZetaData (class in tardis.plasma.properties.atomic)